Research Article

CNNdel: Calling Structural Variations on Low Coverage Data Based on Convolutional Neural Networks

Table 2

Comparisons of different structures.

LayersRun time

C1 + P1 + F1 + F20.70010.70810.70423

C1 + P1 + C2 + P2 + F1 + F20.68940.70690.698030

C1 + P1 + C2 + P2 + C3 + P3 + F1 + F20.68450.71240.698154

” means -score. The unit of run time is seconds. “” indicates accuracy. “” indicates sensitivity.