Research Article

CNNdel: Calling Structural Variations on Low Coverage Data Based on Convolutional Neural Networks

Table 3

Comparisons of different batch sizes with learning rate of 0.1.

BatchRun time

10.66410.65740.660731
80.70240.69060.696420
640.70010.70810.70430
1280.68090.72130.700528
2560.69070.70170.696224
5120.69410.69150.692830
11240.71530.62370.666470
20480.71910.59880.653586
40960.71220.530.6077107
81920.7010.48170.571113

” means -score. The unit of run time is seconds. “” indicates accuracy. “” indicates sensitivity.