Experimental Verification of CAPN1 and CAST Gene Polymorphisms in Different Generations of Da-Heng Broilers

Table 4

Genotype frequency and allele frequency of CAPN1 and CAST gene in the third generation.

Mutations	Lines	Frequency of genotypes			Frequency of alleles		, value
		AA	GG	AG	A	G
SNP1; G3535A	S08	0.00	0.00	1.00	0.50	0.50
	S07	0.29	0.32	0.39	0.48	0.52
	S06	0.00	0.25	0.75	0.37	0.63
	S01	0.25	0.36	0.39	0.45	0.55
	S05	0.26	0.41	0.33	0.43	0.57
	S08 × S07	0.45	0.22	0.33	0.61	0.39
Average value					0.473	0.527
		AA	CC	AC	A	C
SNP2; C7198A	S08	0.11	0.74	0.15	0.19	0.81
	S07	0.07	0.57	0.36	0.25	0.75
	S06	0.19	0.48	0.33	0.35	0.65
	S01	0.08	0.71	0.21	0.18	0.82
	S05	0.07	0.52	0.41	0.28	0.72
	S08 × S07	0.11	0.68	0.21	0.21	0.79
Average value					0.243	0.757
		AA	GG	AG	A	G
SNP4; G9950A	S08	0.07	0.85	0.08	0.11	0.89
	S07	0.18	0.32	0.50	0.43	0.57
	S06	0.185	0.185	0.63	0.50	0.50
	S01	0.11	0.39	0.50	0.36	0.64
	S05	0.00	0.00	1.00	0.50	0.50
	S08 × S07	0.04	0.00	0.96	0.52	0.48
Average value					0.403	0.597
		AA	TT	AT	A	T
SNP5; A33752T	S08	0.33	0.56	0.11	0.39	0.61
	S07	0.07	0.57	0.36	0.25	0.75
	S06	0.56	0.11	0.33	0.73	0.27
	S01	0.25	0.25	0.50	0.50	0.50
	S05	0.41	0.26	0.33	0.57	0.43
	S08 × S07	0.36	0.56	0.08	0.40	0.60
Average value					0.473	0.527
		AA	GG	AG	A	G
SNP6; A37868G	S08	0.18	0.30	0.52	0.44	0.56
	S07	0.18	0.43	0.39	0.38	0.62
	S06	0.15	0.41	0.44	0.37	0.63
	S01	0.29	0.25	0.46	0.52	0.48
	S05	0.26	0.26	0.48	0.50	0.50
	S08 × S07	0.43	0.32	0.25	0.55	0.45
Average value					0.460	0.540