Research Article
Experimental Verification of CAPN1 and CAST Gene Polymorphisms in Different Generations of Da-Heng Broilers
Table 5
Genotype frequency and allele frequency of CAPN1 and CAST gene in the ninth generation.
| | Mutations | Lines | Frequency of genotypes | Frequency of alleles | , value |
| | | | AA | GG | AG | A | G | | SNP1
G3535A | S08 (60) | 12 (0.2) | 6 (0.1) | 42 (0.7) | 66 (0.55) | 54 (0.45) | | | S07 (60) | 18 (0.3) | 21 (0.35) | 21 (0.35) | 57 (0.475) | 63 (0.525) | | S06 (60) | 12 (0.2) | 12 (0.2) | 36 (0.6) | 60 (0.5) | 60 (0.5) | | S01 (70) | 20 (0.28) | 21 (0.3) | 29 (0.42) | 69 (0.49) | 71 (0.51) | | S05 (60) | 3 (0.05) | 36 (0.6) | 21 (0.35) | 27 (0.225) | 93 (0.775) | | S08 × S07 (60) | 33 (0.55) | 12 (0.2) | 15 (0.25) | 81 (0.675) | 39 (0.325) | | Average value | | | | | 0.486 | 0.514 | |
| | | | AA | CC | AC | A | C | | SNP2
C7198A | S08 (60) | 6 (0.1) | 36 (0.6) | 18 (0.3) | 30 (0.25) | 90 (0.75) | | | S07 (60) | 3 (0.05) | 30 (0.5) | 27 (0.45) | 33 (0.275) | 87 (0.725) | | S06 (60) | 21 (0.35) | 18 (0.3) | 21 (0.35) | 63 (0.525) | 57 (0.475) | | S01 (70) | 6 (0.094) | 34 (0.484) | 30 (0.422) | 42 (0.305) | 98 (0.695) | | S05 (60) | 9 (0.15) | 12 (0.2) | 59 (0.65) | 57 (0.475) | 63 (0.525) | | S08 × S07 (60) | 6 (0.1) | 42 (0.7) | 12 (0.2) | 24 (0.2) | 96 (0.8) | | Average value | | | | | 0.338 | 0.662 | |
| | | | AA | GG | AG | A | G | | SNP3
G7324A | S08 (60) | 6 (0.1) | 27 (0.45) | 27 (0.45) | 39 (0.325) | 81 (0.675) | | | S07 (60) | 6 (0.1) | 21 (0.35) | 33 (0.55) | 45 (0.375) | 75 (0.625) | | S06 (60) | 9 (0.15) | 24 (0.4) | 27 (0.45) | 45 (0.375) | 75 (0.625) | | S01 (70) | 5 (0.078) | 27 (0.391) | 38 (0.531) | 48 (0.3429) | 92 (0.6571) | | S05 (60) | 3 (0.05) | 30 (0.5) | 27 (0.45) | 33 (0.275) | 87 (0.725) | | S08 × S07 (60) | 12 (0.2) | 24 (0.4) | 24 (0.4) | 48 (0.4) | 72 (0.6) | | Average value | | | | | 0.357 | 0.643 |
| | | | AA | GG | AG | A | G | | SNP4
G9950A | S08 (60) | 6 (0.1) | 30 (0.5) | 24 (0.4) | 36 (0.3) | 84 (0.7) | | | S07 (60) | 6 (0.1) | 15 (0.25) | 39 (0.65) | 51 (0.425) | 69 (0.575) | | S06 (60) | 15 (0.25) | 18 (0.3) | 27 (0.45) | 57 (0.475) | 63 (0.525) | | S01 (70) | 16 (0.234) | 13 (0.188) | 41 (0.578) | 73 (0.523) | 67 (0.477) | | S05 (60) | 12 (0.2) | 15 (0.25) | 33 (0.55) | 57 (0.475) | 63 (0.525) | | S08 × S07 (60) | 9 (0.15) | 24 (0.4) | 27 (0.45) | 45 (0.375) | 75 (0.625) | | | Average value | | | | | 0.429 | 0.571 | |
| | | | AA | GG | AG | A | G | | SNP6
A37868G | S08 (60) | 45 (0.75) | 0 (0.0) | 15 (0.25) | 105 (0.875) | 15 (0.125) | | | S07 (60) | 33 (0.55) | 0 (0.0) | 27 (0.45) | 93 (0.775) | 27 (0.225) | | S06 (60) | 21 (0.35) | 3 (0.05) | 36 (0.6) | 78 (0.65) | 42 (0.35) | | S01 (70) | 30 (0.429) | 3 (0.043) | 37 (0.528) | 97 (0.6929) | 43 (0.3071) | | S05 (60) | 24 (0.4) | 6 (0.1) | 30 (0.5) | 78 (0.65) | 42 (0.35) | | S08 × S07 (60) | 27 (0.45) | 6 (0.1) | 27 (0.45) | 81 (0.675) | 39 (0.325) | | Average value | | | | | 0.719 | 0.281 | |
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