Detecting the Candidate Gender Determinants by Bioinformatic Prediction of miRNAs and Their Targets from Transcriptome Sequences of the Male and Female Flowers in Salix suchowensis
Table 3
Summary of miRNAs identified in flower budsof the alternate sexes in S. suchowensis.
Name
miRNA family
miRNA sequence (5′-3′)
Number of species
Common in female and male
ssu-miR6423
CCGCUGUCGCCACUAUCUUCCU
1
ssu-miR169
CAGCCAAGGAUGACUUGCCGG
58
ssu-miR162
UCGAUAAACCUCUGCAUCCAG
35
ssu-miR472a
UUUUCCCAACUCCACCCAUCCC
1
ssu-miR1448
CUUUCCAACGCCUCCCAUAC
1
Female-specific
ssu-miR166
GGAAUGUUGUCUGGCUCGAGG
12
ssu-miR390
CGCUAUCCAUCCUGAGUUUCA
5
ssu-miR172a
AGAAUCCUGAUGAUGCUGCAG
3
Male-specific
ssu-miR156
UGACAGAAGAUAGAGAGCAC
14
ssu-miR162d
UGGAGGCAGCGGUUCAUCGAUC
3
ssu-miR160
UGCCUGGCUCCCUGUAUGCC
6
ssu-miR7841
GGGGGUUGCUGUCAAGCAUAA
1
ssu-miR167
AGAUCAUGUGGCAGUUUCACC
4
ssu-miR396
UUCCACAGCUUUCUUGAACUG
44
ssu-miR472c
UCUUGCCUACUCCUCCCAUUCC
1
ssu-miR172b/c
GCAGCACCAUCAAGAUUCACA
2
Number of species indicates in how many plant species the homologous miRNA was detected.
