|
Category | Agents and techniques | Mechanism/description | Significant effects | References |
|
Chemical and enzymatic | (1) Surfactants | Lyse cells by disarranging the phospholipid membrane | | |
Sodium dodecyl sulfate (SDS) | (i) Ionic | (i) Cytotoxic: requires extensive wash process | [45] |
(ii) Alters microstructure (i.e., collagen fibers) | [46, 47] |
Triton X-100 | (i) Nonionic | (i) Less damaging to structure of tissue than ionic surfactants | [34, 48] |
(ii) Commonly used with ammonium hydroxide |
Sodium deoxycholate (SD) | (i) Ionic | (i) Causes agglutination of DNA when used without DNase | [49] |
(ii) Commonly used with DNase | (ii) Remnant DNA fragments | [45, 49–51] |
CHAPS | (i) Zwitterionic | (i) Maintains structural ECM proteins | [40] |
(ii) Remnant cytoplasmic proteins | [40] |
(iii) Maintains ultrastructure | [40, 41] |
(2) Acids and bases | Solubilize cell membrane by utilizing charged properties | | |
Peracetic acid | (i) Highly corrosive | (i) Insufficient cell removal | [45] |
(ii) Oftentimes used for sterilization | (ii) Increases stiffness of ECM | [45, 52] |
Ethylenediaminetetraacetic acid (EDTA) | (i) Commonly used with trypsin | (i) Decreases salt- and acid-soluble ECM proteins | [53] |
Reversible alkaline swelling | (i) Induces negative charge on collagen to cause swelling | (i) Alters mechanical properties | [48] |
(ii) Used with tridecyl alcohol ethoxylate |
(3) Enzymes | Typically used to supplement other chemical & mechanical treatments | | |
Trypsin | (i) Breaks cell-matrix adhesions | | |
(ii) Commonly used with EDTA |
Deoxyribonuclease (DNase) | (i) Breaks down DNA fragments | | |
(ii) Commonly used with SD |
Ribonuclease (RNase) | (i) Breaks down RNA fragments | | |
|
Mechanical | High hydrostatic pressure (HHP) | (i) Pressures greater than 600 MPa applied to lyse cells | (i) Remnant DNA fragments | [23, 28] |
(ii) Denatures ECM proteins | [23] |
Supercritical carbon dioxide | (i) Applies CO2 at pressures above 7.40 MPa and temperatures above 31.1°C | (i) Requires entrainer to remove polar phospholipid membrane | [54] |
(ii) Maintains ECM proteins & mechanical properties | [54] |
Freeze-thaw | (i) Alternate between freezing temperatures (−80°C) and biological temperatures (~37°C) | (i) Maintains ECM proteins & mechanical properties | [55, 56] |
(ii) Remnant DNA | [55] |
|