Characterization and Genome Analysis of a Phthalate Esters-Degrading Strain Sphingobium yanoikuyae SHJ

Table 2

General features of the S. yanoikuyae SHJ genome.

	Chromosome	pSES220	pSES189	Genome
Size (bp)	5,260,163	220,037	189,183	5,669,383
GC content	64.35	63.69	61.42	64.23
Total genes	4,990	222	190	5,402
tRNA genes	61	0	0	61
rRNA genes	12	0	0	12
Other non-coding RNAs	3	0	0	3
Pseudo genes	118	13	12	143
Total number of CDSs	4,796	209	178	5,183
CDSs with assigned function	3,538	126	111	3,775
Hypothetical proteins	1,258	83	67	1,408
CDSs assigned to COGs	3,250	117	85	3,452
CDSs assigned to KEGG Ontoloty	1,213	16	8	1,237
CDSs assigned to GO function	2,536	82	83	2,701
CDSs with Pfam domains	3,880	147	133	4,160
CDSs with signal peptides	674	10	15	699
CDSs with transmembrane helices	1,056	39	36	1,131