High Intraspecific Genetic Diversity of Nocardia brasiliensis, a Pathogen Responsible for Cutaneous Nocardiosis Found in France: Phylogenetic Relationships by Using sod and hsp65 Genes

Table 2

Percentage of similarity expressed in interval and mean for sodA-hsp65 and rrs genes.

		N. brasiliensis HUJEG01		N. brasiliensis ATCC 19296		N. vulneris DSM 45737
		sodA-hsp65	rrs	sodA-hsp65	rrs	sodA-hsp65	rrs
N. brasiliensis ATCC 19296	Similarity average (%)	98.51	99.82	-	-	-	-
N. vulneris DSM 45737		98.38	98.73	98.51	98.55	-	-
N. altamirensis DSM 44997		95.91	98.24	95.41	98.07	95.91	97.47
N. boironii DSM 101696		96.53	98.07	96.28	97.89	96.15	97.29
N. iowensis DSM 45197		94.91	97.89	95.29	97.71	94.54	97.64
N. tenerifensis DSM 44704		96.28	96.67	96.03	96.49	95.91	96.03
Genotype 1	Similarity range (%)	(97.77–98.38)	-	(97.77–98.26)	-	(97.52–98.14)	-
	Similarity average (%)	98.01	-	97.99	-	97.67	-
Genotype 2	Similarity range (%)	(98.39–98.88)	-	(98.88–99.38)	-	(98.63–98.88)	-
	Similarity average (%)	98.73	-	99.19	-	98.80	-
Genotype 3	Similarity range (%)	(98.14–98.88)	-	(98.26–99.00)	-	(98.01–98.76)	-
	Similarity average (%)	98.63	-	98.76	-	98.50	-
All clinical strains	Similarity range (%)	-	(98.57–100)	-	(98.38–99.82)	-	(98.01–99.09)
	Similarity average (%)	-	99.57	-	99.39	-	98.77