Phylogeny of Maleae (Rosaceae) Based on Multiple Chloroplast Regions: Implications to Genera Circumscription

Table 2

Primers used to amplify and sequence 15 regions of chloroplast genome of Rosaceae.

Gene regions	Forward primer (5′-3′)	Reverse primer (5′-3′)	Reference
atpB-rbcL	TTTCCTAATAATTGCTGTACC	ACAGTTGTCCATGTACCAGTAG	Dong et al., 2013 [45]
matK	TCTAGCACACGAAAGTCGAAGT	CGATCTATTCATTCAATATTTC	Dong et al., 2013 [45]
ndhF	ACACCAACGCCATTCGTAATGCCATC	AAGATGAAATTCTTAATGATAGTTGG	Dong et al., 2013 [45]
petA-psbJ	CTAATGTGGGTGGATTTGGTCA	ATGGCCGATACTACTGGAAGG	This study
psbA-trnH	GAACCCGCGCATGGTGGATTCAC	TGGCTCCCTATTCAGTGCTATGC	This study
psbM-trnD	GTTTTTACGTATATTATAAGTA	GTTCAAATCCAGCTCGGCCCA	This study
rbcL	ATGTCACCACAAACAGAGACTAAAGC	TTCCATACTTCACAAGCAGCAGCTAG	Dong et al., 2013 [45]
rpl16	TCCCGAAATAATGAATTGAGTTCG	TCAGAGAAGGTAGGGTTCCCCT	Dong et al., 2013 [45]
rpl20-rps12	ATGATCTCATTGGAAATCATATAAAG	AGGGTAATGATCCATCAACCGGC	Dong et al., 2013 [45]
rps16	GTGGTAGAAAGCAACGTGCGACTT	TCGGGATCGAACATCAATTGCAAC	Oxelman et al., 1997 [85]
trnC-ycf6	GGCGGCATGGCCGAGTGGTAAGGC	TCCACTTCTTCCCCATACTACGA	Dong et al., 2013 [45]
trnH-rpl2	AGCCAACACTTAGATCCGGCTCTAC	GATTTGTGAATCCACCATGCGCG	Dong et al., 2013 [45]
trnL-trnF	GTTCAAGTCCCTCTATCCCCA	GATTTTCAAGAACGGGAATCTTA	Dong et al., 2013 [45]
trnS-trnG	AAACTCTTCGTTTACACAGTAGTGA	CTTTTACCACTAAACTATACCCGC	Dong et al., 2013 [45]
ycf1	TCTCGACGAAAATCAGATTGTTGTGAAT	ATACATGTCAAAGTGATGGAAAA	Dong et al., 2015 [46]