Complete Chloroplast Genome Sequence of Justicia flava: Genome Comparative Analysis and Phylogenetic Relationships among Acanthaceae

Table 4

Codon-anticodon recognition patterns and codon usage of the J. flava chloroplast genome.

Codon	Amino Acid	RSCU	tRNA	Codon	Amino Acid	RSCU	tRNA
UUU	Phe	1.18	trnF-GAA	UAU	Tyr	1.38	trnY-GUA
UUC	Phe	0.82		UAC	Tyr	0.62
UUA	Leu	1.31	trnL-UAA	UAA	Stop	1.01
UUG	Leu	1.31	trnL-CAA	UAG	Stop	1.03
CUU	Leu	1.23	trnL-UAG	CAU	His	1.26	trnH-GUG
CUC	Leu	0.65		CAC	His	0.74
CUA	Leu	0.92		CAA	Gln	1.37	trnQ-UUG
CUG	Leu	0.59		CAG	Gln	0.63
AUU	Ile	1.22	trnI-GAU	AAU	Asn	1.34	trnG-GUU
AUC	Ile	0.82		AAC	Asn	0.66
AUA	Ile	0.95	trnI-CAU	AAA	Lys	1.29	trnK-UUU
AUG	Met	1	trnM-CAU	AAG	Lys	0.71
GUU	Val	1.45	trnV-GAC	GAU	Asp	1.44	trnD-GUC
GUC	Val	0.65		GAC	Asp	0.56
GUG	Val	0.74		GAA	Glu	1.38	trnE-UUC
GUA	Val	1.16	trnV-UAC	GAG	Glu	0.62
UCU	Ser	1.46	trnS-GGA	UGU	Cys	1.14	trnC-GCA
UCC	Ser	0.95		UGC	Cys	0.86
UCG	Ser	0.76		UGA	Stop	0.96
UCA	Ser	1.33	trnS-UGA	UGG	Trp	1	trnW-CCA
CCU	Pro	1.21	trnP-UGG	CGU	Arg	0.84	trnR-ACG
CCC	Pro	0.87		CGC	Arg	0.35	trnR-UCU
CCA	Pro	1.13		CGA	Arg	1.16
CCG	Pro	0.79		CGG	Arg	0.77
ACU	Thr	1.22		AGA	Arg	1.8
ACC	Thr	0.87		AGG	Arg	1.07
ACG	Thr	0.72	trnT-GGU	AGU	Ser	0.92	trnS-GCU
ACA	Thr	1.2	trnT-UGU	AGC	Ser	0.58
GCU	Ala	1.33	trnA-UGC	GGU	Gly	1.18	trnG-GCC
GCC	Ala	0.76		GGC	Gly	0.54
GCA	Ala	1.18		GGA	Gly	1.28
GCG	Ala	0.72		GGG	Gly	0.99	trnG-UCC