Complete Chloroplast Genome Sequence of Justicia flava: Genome Comparative Analysis and Phylogenetic Relationships among Acanthaceae

Table 5

Predicted RNA editing site in the J. flava chloroplast genome.

gene	Nucleotide Position	Amino Acid Position	Codon Conversion	Amino Acid Conversion	Score
accD	800	267	TCG => TTG	S => L	0.8
	844	282	CCC => TCC	P => S	0.8
atpA	776	259	ACC => ATC	T => I	1
	914	305	TCA => TTA	S => L	1
	1270	424	CCC => TCC	P => S	1
atpF	92	31	CCA => CTA	P => L	0.86
atpI	404	135	GCT => GTT	A => V	1
	620	207	TCA => TTA	S => L	1
matK	640	214	CAT => TAT	H => Y	1
	1249	417	CAT => TAT	H => Y	1
ndhA	326	109	ACT => ATT	T => I	1
	566	189	TCA => TTA	S => L	1
	922	308	CTT => TTT	L => F	1
ndhB	149	50	TCA => TTA	S => L	1
	467	156	CCA => CTA	P => L	1
	586	196	CAT => TAT	H => Y	1
	737	246	CCA => CTA	P => L	1
	746	249	TCT => TTT	S => F	1
	830	277	TCA => TTA	S => L	1
	836	279	TCA => TTA	S => L	1
	1292	431	TCC => TTC	S => F	1
	1481	494	CCA => CTA	P => L	1
ndhD	2	1	ACG => ATG	T => M	1
	32	11	GCA => GTA	A => V	1
	878	293	TCA => TTA	S => L	1
	1445	482	GCT => GTT	A => V	1
ndhF	124	42	CTT => TTT	L => F	1
	671	224	CCA => CTA	P => L	1
	713	238	GCT => GTT	A => V	0.8
	1505	502	TCT => TTT	S => F	1
	1667	556	CCC => CTC	P => L	1
	2173	725	CTC => TTC	L => F	1
ndhG	314	105	ACA => ATA	T => I	0.8
petB	617	206	CCA=> CTA	P => L	1
psaI	22	8	CCT => TCT	P => S	1
	28	10	CTT => TTT	L => F	0.86
rpl2	596	199	GCG => GTG	A => V	0.86
rpl20	308	103	TCA => TTA	S => L	0.86
rpoB	338	113	TCT => TTT	S => F	1
	473	158	TCA => TTA	S => L	0.86
	551	184	TCA => TTA	S => L	1
	566	189	TCG => TTG	S => L	1
	593	198	GCT => GTT	A => V	0.86
	2000	667	TCT => TTT	S => F	1
	2426	809	TCA => TTA	S => L	0.86
rpoC2	2290	764	CGG => TGG	R => W	1
	3202	1068	CTT => TTT	L => F	0.86
	3719	1240	TCA => TTA	S => L	0.86
rps2	248	83	TCA => TTA	S => L	1
	266	89	ACA => ATA	T => I	0.86
rps14	80	27	TCA => TTA	S => L	1