Research Article
Handling Big Data Scalability in Biological Domain Using Parallel and Distributed Processing: A Case of Three Biological Semantic Similarity Measures
Table 16
Total time obtained using a distributed system (2, 3, and 4 slaves) with Enhanced SSDD and input data divided by their similarity.
| | Number of Gene Pairs | Original SSDD Total Time (ns) | Threaded SSDD Total Time (ns) (Input Data Divided by Their Similarity) | % Threaded SSDD Total Time (Input Data Divided by Their Similarity) vs. Original SSDD Total Time | | 2 Slaves | 3 Slaves | 4 Slaves | 2 Slaves | 3 Slaves | 4 Slaves |
| | 10 | 3124423720 | 794430504 | 295236711 | 2460790326 | -74.57 | -90.55 | -21.24 | | 100 | 14597347470 | 5126679035 | 2413422396 | 3134281448 | -64.88 | -83.47 | -78.53 | | 1000 | 93710848961 | 39111930797 | 36944258807 | 29763348812 | -58.26 | -60.58 | -68.24 | | 10000 | 4.63634E+11 | 4.13966E+11 | 3.05233E+11 | 3.13192E+11 | -10.71 | -34.17 | -32.45 | | 100000 | 4.48611E+12 | 2.48536E+12 | 1.92535E+12 | 2.06661E+12 | -44.60 | -57.08 | -53.93 | | 1000000 | 2.83292E+13 | 2.16457E+13 | 1.99122E+13 | 1.84843E+13 | -23.59 | -29.71 | -34.75 | | Average | 5.56506E+12 | 4.09835E+12 | 3.69707E+12 | 3.48325E+12 | -46.10 | -59.26 | -48.19 |
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