Research Article
Handling Big Data Scalability in Biological Domain Using Parallel and Distributed Processing: A Case of Three Biological Semantic Similarity Measures
Table 9
Total time obtained using a distributed system (2, 3, and 4 slaves) with Enhanced SSDD and input data divided equally.
| | Number of Gene Pairs | Original SSDD Total Time (ns) | Threaded SSDD Total Time (ns) (Input Data Divided Equally) | % Threaded SSDD Total Time (Input Data Divided Equally) vs. Original SSDD Total Time | | 2 Slaves | 3 Slaves | 4 Slaves | 2 Slaves | 3 Slaves | 4 Slaves |
| | 10 | 3124423720 | 576766602 | 1100200519 | 668881808 | -81.54 | -64.79 | -78.59 | | 100 | 14597347470 | 3979998527 | 5141720453 | 2863699495 | -72.73 | -64.78 | -80.38 | | 1000 | 93710848961 | 28954815547 | 19152967373 | 15747791657 | -69.10 | -79.56 | -83.20 | | 10000 | 4.63634E+11 | 3.31738E+11 | 1.9269E+11 | 1.21739E+11 | -28.45 | -58.44 | -73.74 | | 100000 | 4.48611E+12 | 1.53352E+12 | 1.39815E+12 | 1.50908E+12 | -65.82 | -68.83 | -66.36 | | 1000000 | 2.83292E+13 | 1.65612E+13 | 1.25735E+13 | 2.0722E+13 | -41.54 | -55.62 | -26.85 | | Average | 5.56506E+12 | 3.07667E+12 | 2.36495E+12 | 3.72868E+12 | -59.86 | -65.34 | -68.19 |
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