Long Noncoding RNAs and Messenger RNAs Expression Profiles Potentially Regulated by ZBTB7A in Nasopharyngeal Carcinoma

Table 1

The list of specific primers of 12 differentially expressed lncRNAs and nearby mRNA designed utilizing primer 5.0.

Number	Seqname	Prime Sequence
	(GeneSymbol)
1	NR_047538	F:5′CCCTTATTTTATTCCTGGCTCC3′
	(CDKN2B-AS1)	R:5′CGGATAGAGCAATGAGATGACC3′
	NM_004936	F:5′AGCGAAACACAGAGAAGCGG3′
	(CDKN2B)	R:5′CAGCAGACATTGGAGTGAACG3′
2	NR_033967	F:5′ACAGCAGAAAATGCCCACG3′
	(SLC2A1-AS1)	R:5′GGTTCCCAAATTGTTCCTACC3′
	NM_006516	F:5′ATCATCGGTGTGTACTGCGG3′
	(SLC2A1)	R:5′GTTCTCCTCGTTGCGGTTG3′
3	ENST00000585189	F:AGCTCTGGCATCTCCAGTCA
	(RP11-192H23.5)	R:CAGATCCTGCCGTTGTTACC
	NM_005165	F:5′CAGGATAAGGGCATCGTCG3′
	(ALDOC)	R:5′GCTGGCAGATACTGGCATAAC3′
4	ENST00000398216	F:5′ATGGGTTGAGGGTCTGTTGT3′
	(RP11-54O7.2)	R:5′TTTTCTGAGTGGCCTGGGT3′
	NM_005101	F:5′CAGCTCCATGTCGGTGTCAG3′
	(ISG15)	R:5′GAGGTTCGTCGCATTTGTCC3′
5	ENST00000442852	F:5′TGTCTTCATTAGTCTGGTCCTCC3′
	(XXbac-BPG27H4.8)	R:5′CCTTTCTCCTGGTCATTTGTTC3′
	NM_003897	F:5′CACTCCCCAAAAAGAATCCG3′
	(IER3)	R:5′CTCCGCTGTAGTGTTCTGAGTTC3′
6	uc001enh.1	F:5′CGAGCAATGTTCTGTAGTTGTC3′
	(AX747132)	R:5′GTAAGAATAATATGCCTGGGAA3′
	NM_006472	F:5′CTGATGGGCGGGTGTCTGT3′
	(TXNIP)	R:5′GGCAAGGTAAGTGTGGCGG3′
7	TCONS_00019671	F:5′CAGAGGAAAATAGATGCGACAG3′
	(XLOC_009475)	R:5′TGCGTTCTTAGCCGTGATG3′
	NM_182709	F:5′CTCTACCTGTGCGAGTTCTGC3′
	(KAT5)	R:5′TGTGGAAGCCCTTACAGTCATAC3′
8	TCONS_00020439	F:5′TTCCACCAAAAGCCAGCAC3′
	(XLOC_009769)	R:5′GACTGGGGTTGACCACTCTGT3′
	NM_002205	F:5′GTGACTACTTTGCCGTGAACCA3′
	(ITGA5)	R:5′GAGATGAGGGACTGTAAACCGA3′
9	TCONS_00025256	F:5′CTTGGGAATAGGGTCATCG3′
	(XLOC_012590)	R:5′GCTTCTCCTGTGTGTCTGTCTC3′
	NM_004104	F:5′TCCGAGTCTCCTGACCACTACCT3′
	(FASN)	R:5′GCAGCACCACATCCTCAAACA3′
10	TCONS_00029013	F:5′TCAAAGGAGCAAGGGGAACT3′
	(XLOC_013936)	R:5′ CGCACTTAGCAACCATCACA3′
	NM_101395	F:5′CTGAGCAGACAGGCTGGTATT3′
	(DYRK1A)	R:5′ACAGGTTATCGGCAGAGGTAG3′
11	TCONS_00029159	F:5′GCAAAATGGGGAGGATGAGGT3′
	(XLOC_014103)	R:5′ACCGTCTTGAGGCAGGTGTT3′
	NM_173354	F:5′CTGAGCAGACAGGCTGGTATT3′
	(SIK1)	R:5′ACAGGTTATCGGCAGAGGTAG3′
12	TCONS_00013537	F:5′ GATGGGGATAGGAGGTTGGA3′
	(XLOC_006176)	R:5′GGTGAATTGGGAGATGGAGAA3′
	NM_000940	F:5′TTTTACCAACTCCCTCCTGTCA3′
	(PON3)	R:5′ TGCCCAACTGTATCACCTTCA3′
13	NM_002046.5	F:5′GGGAAACTGTGGCGTGAT3′
	(GAPDH)	R:5′GAGTGGGTGTCGCTGTTGA3′

Seqname: the sequence identifier; GeneSymbol: the symbol of the lncRNA or mRNA.
In Number 1-Number 12, 12 differentially expressed lncRNAs and their nearby mRNAs were validated by qPCR. Italic scripts represented sequence name, gene symbol, and prime sequences of the mRNAs.
GAPDH was used as an internal reference control.