Linking De Novo Assembly Results with Long DNA Reads Using the dnaasm-link Application

Figure 3

Architecture of the dnaasm application. The user can use the application in two ways: through the graphical user interface or a command line. Both ways lead to launching the calculation module in which the presented algorithm is implemented as the shared library. What is more, the calculation module contains an additional shared library in which the de novo assembler has been implemented in advance. Both the mentioned assembler and the presented dnaasm-link scaffolder can be launched in a very similar and convenient way.