Integrated Analysis of a Gene Correlation Network Identifies Critical Regulation of Fibrosis by lncRNAs and TFs in Idiopathic Pulmonary Fibrosis

Table 4

The significant KEGG enrichment analysis of module gene function in idiopathic pulmonary fibrosis.

Pathway	Pathway description	Count	value	Genes
KEGG_Pathway_m1	Ubiquitin mediated proteolysis	30		10273, 10477, 11065, 22954, 23327, 25898, 51433, 51434, 54926, 55070, 57154, 65264, 7318, 7320, 7321, 7323, 7326, 7328, 7332, 7428, 83737, 8454, 8697, 9021, 90293, 9246, 92912, 9820, 991, 6921
KEGG_Pathway_m2	Spliceosome	30		10084, 10262, 10285, 10594, 10907, 10946, 10992, 1665, 22827, 51340, 51690, 57187, 57819, 6428, 6429, 6430, 6432, 6434, 6625, 6626, 6628, 6635, 7307, 8175, 84321, 8449, 84991, 9775, 988, 9984
KEGG_Pathway_m15	Purine metabolism	26		10201, 11128, 124583, 171568, 205, 2987, 29922, 3704, 4831, 4832, 4833, 4881, 50484, 50808, 51251, 5138, 5315, 5422, 6240, 6241, 84284, 953, 955, 956, 2982, 2983
KEGG_Pathway_m16	Fanconi anemia pathway	20		2067, 2072, 2176, 2178, 2188, 2189, 22909, 29089, 51426, 5429, 55120, 5889, 6118, 6119, 672, 80010, 80198, 84464, 80233, 91442
KEGG_Pathway_m4	Protein digestion and absorption	21		1277, 1278, 1281, 1285, 1287, 1288, 1289, 1290, 1292, 1293, 1294, 1299, 1300, 1303, 1306, 1308, 255631, 7373, 80781, 81578, 85301
KEGG_Pathway_m5	Glutathione metabolism	20		124975, 2678, 2687, 27306, 2878, 2879, 2880, 2882, 2937, 2938, 2941, 2948, 2949, 2950, 2952, 373156, 4257, 4258, 493869, 51060
KEGG_Pathway_m6	Ribosome	20		11222, 29088, 51069, 51073, 51116, 51263, 51264, 51318, 54460, 54948, 6183, 63875, 63931, 64928, 64963, 64965, 64983, 65003, 65008, 79590
KEGG_Pathway_m17	Nucleotide excision repair	16		1022, 1069, 1642, 1643, 2067, 2072, 2968, 3978, 5111, 5425, 6118, 6119, 7507, 7508, 8451, 902
KEGG_Pathway_m9	Neuroactive ligand-receptor interaction	25		10161, 10800, 1131, 1241, 148, 154, 185, 1902, 1910, 2149, 2151, 2925, 3061, 3357, 3358, 4829, 4923, 5021, 5028, 5031, 624, 680, 6915, 7201, 9002
KEGG_Pathway_m3	Neuroactive ligand-receptor interaction	25		1129, 1268, 150, 152, 1813, 187, 1901, 1902, 1903, 2357, 2358, 2359, 2587, 2913, 2918, 4543, 4887, 59340, 624, 6752, 6755, 719, 728, 9294, 9568
KEGG_Pathway_m8	Ribosome biogenesis in eukaryotes	12		10171, 10799, 134430, 23560, 27341, 3692, 51096, 51119, 51602, 55341, 55651, 84916
KEGG_Pathway_m7	Ribosome	17		11224, 25873, 51065, 6128, 6141, 6156, 6157, 6160, 6168, 6169, 6181, 6201, 6205, 6229, 6231, 6232, 6234
KEGG_Pathway_m12	Endocytosis	16		10109, 1173, 1759, 1785, 1956, 22905, 26119, 27131, 273, 3949, 408, 5868, 6456, 6643, 867, 8976
KEGG_Pathway_m13	Herpes simplex infection	11		10379, 3105, 3113, 3115, 3122, 3134, 3434, 3661, 4938, 4940, 6041
KEGG_Pathway_m18	Cell cycle	7		4085, 701, 7272, 8379, 890, 891, 9133
KEGG_Pathway_m14	Oocyte meiosis	8		4085, 5516, 5525, 5528, 5529, 8379, 891, 9133
KEGG_Pathway_m11	Vasopressin-regulated water reabsorption	6		10540, 1639, 51164, 79659, 84516, 8655
KEGG_Pathway_m10	Pathogenic Escherichia coli infection	3		203068, 7277, 7846