Research Article
PredDBP-Stack: Prediction of DNA-Binding Proteins from HMM Profiles using a Stacked Ensemble Method
Table 1
Performance comparison of six base classifiers on the PDB1075 dataset using the jackknife test.
| Method | OA (%) | SN (%) | SP (%) | MCC | AUC |
| DT | 74.53 | 74.71 | 74.36 | 0.4906 | 0.7838 | KNN | 76.22 | 75.68 | 76.73 | 0.5240 | 0.8364 | LR | 78.18 | 78.19 | 78.18 | 0.5635 | 0.8508 | XGB | 78.74 | 75.64 | 80.69 | 0.5634 | 0.8624 | RF | 78.28 | 83.4 | 73.45 | 0.5702 | 0.8648 | SVM | 80.34 | 81.66 | 79.27 | 0.6091 | 0.8774 |
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