A Novel Schizophrenia Diagnostic Model Based on Statistically Significant Changes in Gene Methylation in Specific Brain Regions

Table 2

DNA methylation sites in GSE89703 for constructing the SCZ diagnostic model.

Probe ID	Genomic position	Gene	Gene region	value	logFC
cg09615965	chr3:55522560–55522836	WNT5A	TSS1500	0.049	–0.012
cg09229620	chr3:122745183–122746986	NLGN1; NLGN1	5′UTR; 1st exon	0.048	0.038
cg16216907	chr7:107220344–107221075	GLI3	5′UTR	0.014	–0.052
cg10210571	chr1:231663999–231664608	TSNAX-DISC1	TSS200	0.039	–0.022
cg20841191		BAIAP2	Body	0.022	–0.031
cg26475541	chr17:79026043–79026355	BAIAP2	Body	0.022	–0.028
cg17454561	chr2:121745840–121746851	GLI2	Body	0.044	0.025
cg13570972	chr11:31839363–31839813	PAX6	TSS200	0.034	–0.015

FC, fold change; TSS1500, transcription start site 1500; TSS200, transcription start site 200; 5′UTR, 5′ untranslated region.