A Novel Schizophrenia Diagnostic Model Based on Statistically Significant Changes in Gene Methylation in Specific Brain Regions

Table 3

DNA methylation sites in GSE89705 for constructing the SCZ diagnostic model.

Probe ID	Genomic position	Gene	Gene region	value	logFC
cg01777121	chr3:55517658–55517939	WNT5A	Body	0.044	0.028
cg21904441		NLGN1	Body	0.010	0.045
cg02709068		GLI3	Body	0.003	–0.029
cg06213317	chr19:5250458–5250668	PTPRS	Body	0.017	–0.038
cg27420590	chr19:5210564–5210864	PTPRS	3′UTR	0.023	–0.022
cg23476745	chr17:79077317–79077518	BAIAP2	Body	0.043	–0.028
cg23726427		GLI2	Body	0.032	0.022
cg26228577	chr2:121624827–121625209	GLI2	Body	0.010	–0.046
cg05490712		PAX6	5′UTR	0.031	–0.009
cg18058532		PAX6	5′UTR; 1st exon	0.041	0.007

FC, fold change; 3′UTR, 3′ untranslated region; 5′UTR, 5′ untranslated region.