Complete Chloroplast Genomes of 14 Mangroves: Phylogenetic and Comparative Genomic Analyses

Table 3

Number of SSRs in the 14 mangrove chloroplast genomes. Mononucleotide, dinucleotide, trinucleotide, tetranucleotide, pentanucleotide, and hexanucleotide repeat units are abbreviated as u1 to u6.

Species	Total	u1	u1 : A/T	u1 : C/G	u2	u3	u4	u5	u6
Pongamia pinnata	130	84	82	2	31	6	7	1	1
Avicennia marina	61	49	45	4	1	4	7	0	0
Excoecaria agallocha	133	92	87	5	19	7	13	1	1
Bruguiera sexangula	175	106	103	3	31	14	18	5	1
Kandelia obovata	194	106	106	0	36	20	20	10	2
Rhizophora stylosa	169	115	111	4	22	13	8	9	2
Ceriops tagal	142	78	75	3	16	20	23	4	1
Hibiscus tiliaceus	86	55	53	2	15	4	10	2	0
Heritiera littoralis	110	76	74	2	7	6	13	6	2
Thespesia populnea	80	47	44	3	17	3	7	5	1
Sonneratia ovata	112	77	72	5	15	5	10	4	1
Pemphis acidula	88	64	64	0	7	7	9	1	0
Laguncularia racemosa	118	98	96	2	6	5	8	1	0
Xylocarpus moluccensis	98	72	71	1	6	6	11	3	0