Research Article
The Immune Cell Landscape in Different Anatomical Structures of Knee in Osteoarthritis: A Gene Expression-Based Study
Table 1
Profiling datasets of Gene Expression Omnibus (GEO).
| | Tissue source | GEO ID | Normal | Case | Platform | Year | Country | Author |
| | Knee cartilage | GSE43191 | 0 | 23 | GPL11532 [HuGene-1_1-st] Affymetrix Human Gene 1.1 ST Array | 2016 | Spain | Fernández-Tajes J | | GSE64394 | 5 | 2 | GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array | 2018 | USA | Bhutani N | | GSE98460 | 0 | 46 | GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array | 2019 | USA | Muhammad Farooq Rai |
| | Knee synovial tissue | GSE12021 | 13 | 20 | GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
GPL97 [HG-U133B] Affymetrix Human Genome U133B Array | 2018 | Germany | Huber R | | GSE32317 | 0 | 19 | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 2019 | USA | Scanzello CR | | GSE36700 | 0 | 5 | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 2019 | Belgium | Lauwerys BR | | GSE39340 | 0 | 7 | GPL10558 Illumina HumanHT-12 V4.0 Expression BeadChip | 2018 | China | Xiaotian C | | GSE41038 | 4 | 3 | GPL6883 Illumina HumanRef-8 v3.0 Expression BeadChip | 2019 | Australia | Thomas GP | | GSE46750 | 0 | 12 | GPL10558 Illumina HumanHT-12 V4.0 Expression BeadChip | 2018 | Belgium | Lambert C | | GSE55235 | 10 | 10 | GPL96 [HG-U133A] Affymetrix Human Genome U133A Array | 2018 | Germany | Thomas H | | GSE55457 | 10 | 10 | GPL96 [HG-U133A] Affymetrix Human Genome U133A Array | 2018 | Germany | Kinne RW | | GSE55584 | 0 | 6 | GPL96 [HG-U133A] Affymetrix Human Genome U133A Array | 2018 | Germany | Peter S | | GSE82107 | 7 | 10 | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 2019 | Netherlands | de Vries M |
| | Knee meniscus | GSE19060 | 3 | 5 | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 2019 | USA | Sun Y | | GSE52042 | 0 | 8 | GPL17882 Microarrays Inc. Human MI Ready Array–49K Genomic Array | 2014 | Germany | Von der Heyde S | | GSE98918 | 12 | 12 | GPL20844 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray | 2018 | USA | Zhang B |
| | Knee subchondral bone | GSE51588 | 10 | 40 | GPL13497 Agilent-026652 Whole Human Genome Microarray | 2018 | USA | Chou CH |
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Year: last update date. Author: contact name. |
