Identification and Validation of a Prognostic Model Based on Three Autophagy-Related Genes in Hepatocellular Carcinoma

Table 2

Characteristics of the differentially expressed autophagy-related genes by using the Wilcoxon rank-sum test (tumor vs. normal).

Gene symbol	logFC	Regulation	value	FDR
BIRC5	4.8146253	Up
PEA15	1.83411226	Up
RAB24	1.70056392	Up
CLN3	1.7043542	Up
HSP90AB1	1.63411809	Up
MAPK3	1.37850531	Up
CAPN10	1.49940395	Up
CDKN2A	4.65431982	Up
RHEB	1.21520158	Up
RPTOR	1.30199062	Up
TSC1	1.56728821	Up
ATG4B	1.05882354	Up
ATIC	1.26886226	Up
ITGA6	2.05950447	Up
FKBP1A	1.164278	Up
TP73	4.10294233	Up
ULK3	1.25487092	Up
MLST8	1.04550722	Up
CAPNS1	1.10213996	Up
PARP1	1.34948718	Up
BAX	1.52707657	Up
ATG10	1.0226174	Up
DIRAS3	-2.2142941	Down
HGS	1.59409057	Up
TSC2	1.1673426	Up
CANX	1.10228843	Up
WDR45B	1.03610977	Up
FOS	-2.4192498	Down
DAPK2	2.15868832	Up
NPC1	1.40873288	Up
GAPDH	1.24841467	Up
PELP1	1.02773866	Up
HSPA5	1.07141566	Up
HDAC1	1.0260015	Up
VMP1	1.03638398	Up
RUBCN	1.05799379	Up
BAK1	1.61591549	Up
CD46	1.12531986	Up
CASP3	1.01180546	Up
DDIT3	1.50655255	Up
CAPN2	1.4191918	Up
SQSTM1	1.73640938	Up
PRKCD	1.41302501	Up
CASP8	1.04011948	Up
FOXO1	-1.0757149	Down
SPNS1	1.31587141	Up
RB1CC1	1.01420177	Up
ATG16L2	1.02505335	Up
NRG1	-1.280118	Down
DRAM1	1.2000343	Up
IKBKE	1.86880957	Up
TMEM74	2.33376628	Up
ITGB4	2.37261675	Up
RGS19	1.11586497	Up
NRG2	2.87978625	Up
ATG9B	1.05236942	Up
SPHK1	2.84999763	Up
ITGA3	2.09689798	Up
TP63	1.90806327	Up
IRGM	2.45185036	Up
NKX2-3	2.56776198	Up
HSPB8	2.02223664	Up

logFC: log(fold change); FDR: false discovery rate.