Research Article
Identification of MicroRNAs in Taxillus chinensis (DC.) Danser Seeds under Cold Stress
Table 3
Key miRNAs and their targets involved in cold response and seed germination.
| Function | Target | Annotation | miRNA | A1_vs._A0 | A2_vs._A0 | A2_vs._A1 |
| Response to cold | c43520_g1_i1 | Soluble inorganic pyrophosphatase 1, chloroplastic-like | miR4228 | NC | NC | Up | c48194_g1_i4 | Phospholipase D p1-like | miR8036 | Down | NC | Up | c47711_g1_i2 | Thylakoid lumenal 15 kDa protein 1, chloroplastic | aly-miR390a-3p | Up | NC | NC | c47711_g1_i4 | Hypothetical protein GLYMA_11G222100 | c47711_g1_i3 | Hypothetical protein VITISV_013914 | c47711_g1_i1 | Hypothetical protein GLYMA_11G222100 | c51250_g1_i1 | Gibberellin receptor GID1B | zma-miR164d-5p | NC | NC | Down | Response to abiotic stimulus | c29605_g1_i1 | Uncharacterized protein LOC100247992 | gma-miR1520o-3p | Up | NC | Down | c34743_g1_i3 | RNA pseudouridine synthase 1-like | c53051_g1_i1_18088-5p | NC | Down | Down | c44975_g1_i2 | Uncharacterized protein LOC105644596 | sly-miR10539-3p | Up | NC | Down | Embryo development ending in seed dormancy | c46765_g2_i1 | ruBisCO large subunit-binding protein subunit alpha | th-miR3434-5p | NC | Up | Up | c52633_g2_i3 | ATP-dependent zinc metalloprotease FtsH | MIR5998 | NC | NC | Up | Seed germination | c51250_g1_i1 | Gibberellin receptor GID1B | zma-miR164d-5p | NC | NC | Down | Seed dormancy process | Mucilage extrusion from seed coat | c49078_g1_i1 | Subtilisin-like protease SBT1.7 | gma-miR1520o-3p | Up | NC | Down | Mucilage metabolic process involved in seed coat development | Seed coat development | c50468_g1_i1 | Subtilisin-like protease SBT1.7 |
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