Research Article

Virtual Screening of Phytochemicals by Targeting HR1 Domain of SARS-CoV-2 S Protein: Molecular Docking, Molecular Dynamics Simulations, and DFT Studies

Table 2

Average RMSD values for all complexes at temperatures 300 K, 325 K, 340 K, and 350 K.

The complex of HR1 and phytochemicalsAverage RMSD at various temperatures (Å)
300 K325 K340 K350 K

SilybinC0.550.771.251.36
Isopomiferin0.591.041.291.61
Lycopene1.201.701.891.96
SilydianinB1.651.882.622.87
Silydianin1.701.932.722.94