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| Bacteria | Main characteristics of the genome | Determinants of bacteriocin synthesis | Determinants of antibiotic resistance | Determinants of sugar metabolism | Determinants of exopolysaccharide synthesis |
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| L. plantarum 8 RA 3 | GenBank number LBDF00000000
Genome type draft
Number of contigs 18
Genome size 3,330,093 bp
Average coverage 250.0
GC composition 44.4%
CDS quantity 2982 | KLD40925.1, KLD40929.1, KLD40930.1, KLD40931.1, KLD40932.1, KLD40933.1
Contig 4 LBDF01000008.1 | Efflux pumps
MatE
KLD43042.1
MFS
KLD43077.1 | 426 determinants
Fructose bisphosphate pathway
Pentose phosphate pathway
Utilization of fructooligosaccharides and raffinose: Msm KLD40778.1, PTS KLD43366.1, KLD43367.1, KLD43368.1, SacA KLD43120.1, DexB KLD43365.1, Aga KLD42863.1, Man KLD43356.1 и BG KLD41117.1
Utilization of amino sugars: NagA KLD43035.1, NagB KLD43152.1, PTS NagT KLD42190.1, NagR KLD40894.1, Cbp KLD42577.1 ChiA KLD43348.1
Glycogen metabolism: GAT KLD43421.1, GS KLD43423.1, GP KLD43424.1 | Eps operon
EpsB KLD41507.1
EpsC KLD40740.1
EpsD KLD40739.1
EpsE KLD41508.1
EpsF KLD41509.1
Contig 15
LBDF01000011.1 |
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| L. fermentum 90 TC-4 | GenBank number
LBDH00000000
Genome type draft
Number of contigs 93
Genome size 1,822,484 bp
Average coverage 250.0
GC composition 51.9%
CDS 1620 quantity | | Efflux pumps
MatE
KLD54124.1
MFS
KLD53990.1 | 113 determinants
Pentose phosphate
Pathway utilization of disaccharides: GalK KLD53103.1, FruK KLD55067.1, α-Gal KLD53100.1, β-Gal WP_046949162.1, mapA P_046948545.1, β-glucosidase KLD43584.1 | Eps operon
EpsB KLD49590.1
EpsC KLD49588.1
EpsD KLD49589.1
Contig 15
LBDH01000061.1 |
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| L. fermentum 39 | GenBank number LBDG00000000
Genome type draft
Number of contigs 55
Genome size 1,829,655 bp
Average coverage 250.0
GC composition 51.6%
CDS quantity 1683 | | Efflux pump
MatE
KLD56150.1 | 118 determinants
Pentose phosphate metabolic pathway
Utilization of arabinose: AraR KLD56054.1, AraK KLD56053.1, AraA KLD56052.1, AraD KLD56052.1, AraT KLD56053.1
Glycerol utilization: GlpT KLD54015.1, GlpF KLD56071.1, GlpK KLD55877.1, GPD KLD55407.1
Riboflavin metabolism: RybD KLD54636.1, RSA KLD54605.1 | Eps operon
EpsB KLD51897.1
EpsC KLD51899.1
EpsD KLD51898.1
EpsE KLD51903.1
Contig 20
LBDG01000035.1 |
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| B. longum 379 | GenBank number LKUQ00000000
Genome type draft
Number of contigs 24
Genome size 2,387,620 bp
Average coverage 150.0
GC composition 60.2%
CDS 1903 quantity | | Efflux pump
MatE
KYJ82530.1
цитоплазматический белок tetW KYJ81078.1 | 199 determinants
Fructose-6-phosphate phosphoketolase pathway
Amino sugar metabolism: NagK KYJ78240.1, NagA KYJ78237.1, NagB KYJ78238.1, NagT KYJ81992.1, NagR KYJ82080.1
Glycogen metabolism: GAT KYJ81114.1, GS KYJ81082.1, GBr KYJ82453.1, GP KYJ83271.1, GdBr KYJ82081.1, AMse KYJ82084.1, MalE KYJ78457.1
Utilization of raffinose and fructooligosaccharides: MsmR KYJ82093.1, MsmE KYJ82142.1, MsmF KYJ82092.1, MsmG, KYJ82141.1, SacA KYJ78008.1, Aga KYJ83465.1 | Genes for rhamnose synthesis, contig 5 LKUQ01000020.1
Capsular polysaccharide genes: Wzb KYJ83195.1, Wzc KYJ83223.1
Sortase dependent pili: SrtA KYJ83477, AP KYJ83476.1
Lipoproteins: Lgt KYJ83617.1, LspA KYJ77995.1 |
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| B. bifidum 1 | GenBank NDXI00000000
Genome type draft
Number of contigs 13
Genome size 2,198,027 bp
Average coverage 385.0
GC composition 62.7%
CDS 1521 quantity | | Efflux pump
MatE
PDH98462.1 | 175 determinants
Fructose-6-phosphate phosphoketolase pathway
Amino sugar metabolism: NagK PDH98478.1, NagA PDH97531.1, NagB PDH98129.1, NagT PDH97280.1, CbsA PDH98222.1, Aga PDH97428.1 | Sortase dependent pili: SrtA PDH97100.1, PDH97310.1
Lipoproteins: Lgt PDH98440.1, LspA PDH98074.1 |
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| B. bifidum 791 | GenBank number LKUR00000000
Genome type draft
Number of contigs 33
Genome size 2,285,457 bp
Average coverage 150.0
GC composition 62.4%
CDS 1769 quantity | | Efflux pumps
MatE
KYJ84349.1, KYJ84414.1 | 207 determinants
Fructose-6-phosphate phosphoketolase pathway
Amino sugar metabolism: NagK KYJ84330, NagA KYJ85076.1, NagB KYJ85077.1, NagT KYJ85215.1, KYJ85216.1, NagR KYJ85078.1, CbsA KYJ83728.1, Aga KYJ84485.1
Glycogen metabolism: GAT KYJ83153.1, GS KYJ84446.1, GBr KYJ84933.1, GP KYJ84691.1, GdBr KYJ85154.1, AMse KYJ84544.1 | Genes for the synthesis of rhamnose, contig 3 LKUR01000023.1
Sortase dependent pili: SrtA KYJ84870.1, AP KYJ84871.1
Lipoproteins: Lgt KYJ84380.1, LspA KYJ85145.1 |
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