Research Article
Identification of Critical Genes and lncRNAs in Osteolysis after Total Hip Arthroplasty and Osteoarthritis by RNA Sequencing
Table 2
Top 10 up- and downregulated DEmRNAs.
| Symbol | log2FC | value | FDR | Regulation |
| OA vs. control | HIST2H4A | 2.017903 | 1.45-12 | 1.86-08 | Up | ZNF778 | 2.30578 | 2.34-09 | 1.50E-05 | Up | RAB8A | 1.084187 | 4.61-07 | 0.001473 | Up | MYOM2 | 3.614517 | 1.16-05 | 0.021164 | Up | PI3 | 1.77021 | 4.16-05 | 0.05915 | Up | VASH1 | 1.031837 | 0.000207 | 0.203576 | Up | SNHG28 | 1.440766 | 0.000309 | 0.263506 | Up | LILRB3 | 1.133152 | 0.000349 | 0.27883 | Up | UPRT | 1.107994 | 0.000428 | 0.322295 | Up | UNC13B | 1.407436 | 0.000467 | 0.331741 | Up | CD8A | -1.49304 | 2.03-07 | 0.000865 | Down | AL157935.2 | -3.11394 | 2.71-06 | 0.006946 | Down | AL121594.1 | -3.12822 | 4.34-06 | 0.00926 | Down | EPHB4 | -2.33741 | 1.40-05 | 0.022395 | Down | F11R | -1.30037 | 6.96-05 | 0.080899 | Down | YPEL2 | -1.41993 | 0.000184 | 0.196205 | Down | CHKB-CPT1B | -1.48977 | 0.00028 | 0.255821 | Down | ZNF80 | -1.53824 | 0.000671 | 0.393542 | Down | EEF1AKMT3 | -1.76553 | 0.000677 | 0.393542 | Down | CD8B | -1.42735 | 0.000767 | 0.426828 | Down | Osteolysis vs. control | ZNF778 | 2.261961 | 6.77-08 | 0.000222 | Up | LILRB3 | 1.396428 | 1.23-06 | 0.003224 | Up | MYOM2 | 3.476227 | 3.33-06 | 0.00575 | Up | BCORL1 | 2.051727 | 1.40-05 | 0.018296 | Up | RTL5 | 1.812327 | 1.85-05 | 0.022092 | Up | FOSL2 | 1.834524 | 3.50-05 | 0.026994 | Up | CNTNAP3 | 2.346929 | 7.26-05 | 0.047612 | Up | MGAM2 | 2.714451 | 9.47-05 | 0.049807 | Up | ERV3-1 | 1.398861 | 9.50-05 | 0.049807 | Up | TMEM164 | 1.378476 | 0.000107 | 0.053473 | Up | TMEM56-RWDD3 | -3.54683 | 9.81-12 | 1.29-07 | Down | AC013489.1 | -4.17415 | 3.51-06 | 0.00575 | Down | PLVAP | -2.61008 | 2.39-05 | 0.026097 | Down | PPDPF | -2.88183 | 2.75-05 | 0.026397 | Down | RPS26 | -2.22182 | 2.82-05 | 0.026397 | Down | HBB | -2.40451 | 3.29-05 | 0.026994 | Down | RGS6 | -2.33305 | 4.89-05 | 0.035625 | Down | EVPL | -3.08781 | 5.28-05 | 0.036452 | Down | RIOK3 | -2.15799 | 7.94-05 | 0.049573 | Down | LRRN3 | -2.13595 | 8.98-05 | 0.049807 | Down | Osteolysis vs. OA | EPHB4 | 3.187856 | 9.59-07 | 0.003135 | Up | RASSF5 | 1.444879 | 1.47-05 | 0.023969 | Up | FAM118A | 1.406201 | 4.97-05 | 0.064931 | Up | AL354822.1 | 2.9104 | 0.000364 | 0.250326 | Up | AL121594.1 | 2.129941 | 0.0004 | 0.259591 | Up | ZNF587 | 1.181929 | 0.000736 | 0.320854 | Up | SERPING1 | 1.589099 | 0.002698 | 0.608048 | Up | LRP1 | 1.363794 | 0.004148 | 0.796847 | Up | CASP10 | 1.098776 | 0.004527 | 0.796847 | Up | REC8 | 1.074025 | 0.004665 | 0.796847 | Up | MTURN | -1.58117 | 1.09-05 | 0.021921 | Down | HBB | -2.3627 | 1.17-05 | 0.021921 | Down | CISD2 | -1.29668 | 6.10-05 | 0.07251 | Down | AC093668.3 | -2.78122 | 6.93-05 | 0.073252 | Down | DDA1 | -1.3542 | 8.91-05 | 0.08323 | Down | AC013489.1 | -3.94451 | 0.000133 | 0.11567 | Down | ARL4A | -1.83919 | 0.00018 | 0.147286 | Down | EPB41 | -1.62564 | 0.000288 | 0.221659 | Down | CR1L | -1.61874 | 0.000353 | 0.250326 | Down | DLGAP5 | -2.34576 | 0.000426 | 0.259591 | Down |
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FC: fold change; FDR: false discovery rate; OA: osteoarthritis.
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