Genetic Diversity of Shanlan Upland Rice (Oryza sativa L.) and Association Analysis of SSR Markers Linked to Agronomic Traits
Table 5
Percentage of total variations explained by SSR markers linked to agronomic traits of Shanlan upland rice accessions (%).
No.
SSR marker
Agronomic traits
PH
PN
PL
TG
FG
SR
TW
1
OSR28
17.93
12.45
2
RM17
10.20
11.40
24.11
3
RM190
9.50
10.42
4
RM208
42.62
20.63
10.26
5
RM21
10.28
16.56
23.19
6
RM219
10.31
12.71
7
RM253
17.93
12.45
18.09
12.88
8
RM267
9.71
9
RM278
11.59
10
RM331
10.43
11
RM332
12.36
22.52
12
RM3331
9.54
13
RM336
14.43
14
RM423
15.81
15
RM424
10.31
16
RM481
28.67
12.43
19.16
13.55
17
RM493
11.97
11.74
13.22
15.10
14.21
19.64
18
RM567
17.93
12.45
11.95
24.61
19
RM571
20.66
20
RM583
0.12
21
RM590
14.80
16.98
22
RM71
17.93
12.45
23
RM7102
11.59
24
RM72
12.66
14.27
25
RM85
24.18
9.44
PH: plant height; PN: effective panicle number per plant; PL: panicle length; TG: total number of grains; FG: number of filled grains; SR: seed setting rate; TW: 1000-grain weight.