Research Article
Sequence Fusion Algorithm of Tumor Gene Sequencing and Alignment Based on Machine Learning
Table 4
Comparison of parameters of four variation detection tools.
| Soft | System | Input | Output | Identifies |
| GATK | Lin | SAM/BAM | VCF | SNP, InDel | BCFtools | Lin | SAM/BAM | VCF | SNP, InDel | FreeBayes | Lin | SAM/BAM | VCF | SNP, InDel | VarScan 2 | Lin, Mac, Win | Mpileup | VCF, CSV | SNP, InDel, CNV |
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