Comparative Genomics Reveals Pathogenicity-Related Loci in Shewanella algae

Table 1

Strains and genomic features of S. algae strains in this study.

Strain	Isolation source	Geographic origin	Genome assembly status	Genome coverage	Genome size (bp)	GC content (%)	CDSs	Pseudogenes	rRNA operons	tRNAs
CHL	Bile	Taiwan	Scaffold	243.0x	4,888,589	52.96	4,281	122	6, 5, 2 (5S, 16S, 23S)	88
YHL	Wound	Taiwan	Scaffold	257.0x	4,850,439	53.00	4,212	71	6, 5, 2 (5S, 16S, 23S)	86
ACCC	Bile	Taiwan	Scaffold	186.0x	4,744,804	53.08	4,223	143	4, 4 (5S, 16S)	91
MARS 14	Lung	France	Scaffold	91.0x	5,005,849	52.90	4,347	90	6, 3, 3 (5S, 16S, 23S)	104