Comparative Genomics Reveals Pathogenicity-Related Loci in Shewanella algae

Table 2

Virulence genes shared with S. algae strains in this study.

Gene	locus_tag	Length	locus_tag	Length	locus_tag	Length	locus_tag	Length
Strains	MARS 14		YHL		CHL		ACCC
hlyA	BN1227_RS19795	443	AYI97_RS17645	443	AYI82_RS07480	443	AYI77_RS13890	443
hlyD	BN1227_RS18765	352	AYI97_RS03440	352	AYI82_RS00925	352	AYI77_RS05040	352
	BN1227_RS19395	349	AYI97_RS04065	349	AYI82_RS01570	349	AYI77_RS08410	349
	BN1227_RS08585	314	AYI97_RS05045	314	AYI82_RS17560	314	AYI77_RS14620	314
hlyIII	BN1227_RS10295	226	AYI97_RS09385	226	AYI82_RS06545	226	AYI77_RS04320	226
tolC	BN1227_RS02290	424	AYI97_RS03690; AYI97_RS12455; AYI97_RS17535; AYI97_RS18425	466; 438; 467; 491	AYI82_RS01185; AYI82_RS03510; AYI82_RS07370	466; 438; 467	AYI77_RS01075; AYI77_RS01845; AYI77_RS02720; AYI77_RS04785; AYI77_RS13995	491
	BN1227_RS02895	438						438
	BN1227_RS03705	491						424
	BN1227_RS12395	438						466
	BN1227_RS19025	466						467
	BN1227_RS19685	467
htpB (groL)	BN1227_RS18535	546	AYI97_RS03170	546	AYI82_RS00700	546	AYI77_RS05265	546
galU	BN1227_RS14240	303	AYI97_RS19990	303	AYI82_RS13425	303	AYI77_RS03360	303
					AYI82_RS18495	294	AYI77_RS16730	294
exbB	BN1227_RS13275	175	AYI97_RS02650	238	AYI82_RS00200	238	AYI77_RS07050	175
	BN1227_RS13280	451	AYI97_RS04225	164	AYI82_RS01760	164	AYI77_RS07055	451
	BN1227_RS17925	238	AYI97_RS14790	175	AYI82_RS21410	175	AYI77_RS08255	164
	BN1227_RS19555	164	AYI97_RS14795	451	AYI82_RS21415	451	AYI77_RS08875	238
exbD	BN1227_RS13270	134	AYI97_RS02655	135	AYI82_RS00205	135	AYI77_RS07045	134
	BN1227_RS17930	135	AYI97_RS04230	135	AYI82_RS01765	135	AYI77_RS08250	135
	BN1227_RS19560	135	AYI97_RS14785	134	AYI82_RS21405	134	AYI77_RS08870	135
cheY	BN1227_RS07095	127	AYI97_RS06385	127	AYI82_RS05630	127	AYI77_RS20450	127
cheZ	BN1227_RS07100	245	AYI97_RS06380	245	AYI82_RS05625	245	AYI77_RS20455	245
cheA	BN1227_RS01115	701	AYI97_RS06375	776	AYI82_RS05620	770	AYI77_RS12010	696
	BN1227_RS07105	776	AYI97_RS16805	696	AYI82_RS09360	701	AYI77_RS20925	754
cheW	BN1227_RS07130	164	AYI97_RS06350	164	AYI82_RS05595	164	AYI77_RS20950	164
	BN1227_RS01120	183	AYI97_RS16800	183	AYI82_RS05600	336	AYI77_RS12015	183
	BN1227_RS07125	336	AYI97_RS06355	335	AYI82_RS09355	183	AYI77_RS20945	336
clpP	BN1227_RS08465	202	AYI97_RS05170	202	AYI82_RS17685	202	AYI77_RS14495	202
FlgA	BN1227_RS06885	235	AYI97_RS06595	235	AYI82_RS05050	248	AYI77_RS09380	248
	BN1227_RS21260	248	AYI97_RS14310	248	AYI82_RS05840	235	AYI77_RS20850	235
FlgB	BN1227_RS06900	132	AYI97_RS06580	132	AYI82_RS05045	116	AYI77_RS09385	116
	BN1227_RS21255	116	AYI97_RS14305	116	AYI82_RS05825	132	AYI77_RS20835	132
FlgC	BN1227_RS06905	138	AYI97_RS06575	138	AYI82_RS05040	136	AYI77_RS09390	136
	BN1227_RS21250	136	AYI97_RS14300	136	AYI82_RS05820	138	AYI77_RS20830	138
FlgD	BN1227_RS21245	221	AYI97_RS06570	227	AYI82_RS05035	221	AYI77_RS09395	221
			AYI97_RS14295	221	AYI82_RS05815	227	AYI77_RS20825	227
FlgE	BN1227_RS06915	453	AYI97_RS06565	453	AYI82_RS05810	453	AYI77_RS20820	453
FlgF	BN1227_RS06920	247	AYI97_RS06560	247	AYI82_RS05805	247	AYI77_RS20815	247
FlgG	BN1227_RS06925	262	AYI97_RS06555	262	AYI82_RS05020	261	AYI77_RS09410	261
	BN1227_RS21230	261	AYI97_RS14280	261	AYI82_RS05800	262	AYI77_RS20810	262
FlgH	BN1227_RS06930	224	AYI97_RS06550	363	AYI82_RS05015	223	AYI77_RS09415	223
	BN1227_RS21225	223	AYI97_RS14275	224; 223	AYI82_RS05795	224	AYI77_RS20805	224
FlgI	BN1227_RS06935	363	AYI97_RS06545	363	AYI82_RS05010	373	AYI77_RS09420	359
	BN1227_RS21220	373	AYI97_RS14270	373	AYI82_RS05790	363	AYI77_RS20800	363
FlgJ	BN1227_RS06940	336	AYI97_RS06540	336	AYI82_RS05785	336	AYI77_RS20795	336
FlgK	BN1227_RS06945	641	AYI97_RS06535	641	AYI82_RS05000	456	AYI77_RS09430	456
	BN1227_RS21210	456	AYI97_RS14260	456	AYI82_RS05780	641	AYI77_RS20790	641
FlgL	BN1227_RS06950	401	AYI97_RS06530	401	AYI82_RS05775	401	AYI77_RS20785
FlgM	BN1227_RS06880	106	AYI97_RS06600	106	AYI82_RS05055	94	AYI77_RS09375	94
	BN1227_RS21265	94	AYI97_RS14315	94	AYI82_RS05845	106	AYI77_RS20855	106
FlgN	BN1227_RS06875	143	AYI97_RS06605	143	AYI82_RS05060	171	AYI77_RS09370	171
					AYI82_RS05850	143	AYI77_RS20860	143
FlgP	BN1227_RS06870	155	AYI97_RS06610	155	AYI82_RS05855	155	AYI77_RS20865	155
FlgT	BN1227_RS06860	385	AYI97_RS06620	385	AYI82_RS05865	385	AYI77_RS20875	385
FliA	BN1227_RS07090	239	AYI97_RS06390	239	AYI82_RS04955	236	AYI77_RS20445	239
	BN1227_RS21165	236	AYI97_RS14215	236	AYI82_RS05635	239	AYI77_RS09475	236
FliD	BN1227_RS06970	456	AYI97_RS06510	456	AYI82_RS04980	445	AYI77_RS20325	451
	BN1227_RS21190	445	AYI97_RS14240	445	AYI82_RS05755	456
FliE	BN1227_RS07000	110	AYI97_RS06480	110	AYI82_RS05090	111	AYI77_RS09340	111
	BN1227_RS21300	111	AYI97_RS14350	111	AYI82_RS05725	110	AYI77_RS20355	110
FliF	BN1227_RS07005	569	AYI97_RS06475	569	AYI82_RS05085	555	AYI77_RS09345	555
	BN1227_RS21295	555	AYI97_RS14345	555	AYI82_RS05720	569	AYI77_RS20360	569
FliG	BN1227_RS07010	347	AYI97_RS06470	347	AYI82_RS05080	328	AYI77_RS09350	324
	BN1227_RS21290	328	AYI97_RS14340	328	AYI82_RS05715	347	AYI77_RS20365	347
FliH	BN1227_RS07015	322	AYI97_RS06465	324	AYI82_RS05710	324	AYI77_RS20370	324
FliI	BN1227_RS07020	446	AYI97_RS06460	446	AYI82_RS05070	441	AYI77_RS09360	441
	BN1227_RS21280	441	AYI97_RS14330	441	AYI82_RS05705	446	AYI77_RS20375	446
FliJ	BN1227_RS07025	149	AYI97_RS06455	149	AYI82_RS05700	149	AYI77_RS20380	149
FliL	BN1227_RS00740	135	AYI97_RS06445	174	AYI82_RS04960	145	AYI77_RS11650	135
	BN1227_RS07035	174	AYI97_RS14220	145	AYI82_RS05690	174	AYI77_RS20390	174
	BN1227_RS21170	145	AYI97_RS17155	135	AYI82_RS09710	135
FliM	BN1227_RS07040	342	AYI97_RS06440	342	AYI82_RS05685	342	AYI77_RS18030	238
	BN1227_RS21315	300	AYI97_RS14365	300			AYI77_RS20395	342
FliN	BN1227_RS07045	126	AYI97_RS06435	126	AYI82_RS05110	114	AYI77_RS18025	114
	BN1227_RS21320	114	AYI97_RS14370	114	AYI82_RS05680	126	AYI77_RS20400	126
FliO	BN1227_RS07050	119	AYI97_RS06430	119	AYI82_RS05675	119	AYI77_RS20405	119
FliP	BN1227_RS07055	247	AYI97_RS06425	247	AYI82_RS05115	265	AYI77_RS18020	265
	BN1227_RS21325	265	AYI97_RS14375	265	AYI82_RS05670	247	AYI77_RS20410	247
FliQ	BN1227_RS07060	89	AYI97_RS06420	89	AYI82_RS05120	89	AYI77_RS18015	89
	BN1227_RS21330	89	AYI97_RS14380	89	AYI82_RS05665	89	AYI77_RS20415	89
FliR	BN1227_RS07065	265	AYI97_RS06415	265	AYI82_RS05125	259	AYI77_RS18010	259
	BN1227_RS21335	259	AYI97_RS14385	259	AYI82_RS05660	265	AYI77_RS20420	265
FliS	BN1227_RS06980	136	AYI97_RS06500	136	AYI82_RS04975	126	AYI77_RS09455	126
	BN1227_RS21185	126	AYI97_RS14235	126	AYI82_RS05745	136	AYI77_RS20335	136
flhA	BN1227_RS21345	692	AYI97_RS14395	692	AYI82_RS05135	692	AYI77_RS18000	692
	BN1227_RS07075	701	AYI97_RS06405	701	AYI82_RS05650	701	AYI77_RS20430	701
flhB	BN1227_RS07140	105	AYI97_RS06340	105	AYI82_RS05585	105	AYI77_RS20960	105
	BN1227_RS21340	376	AYI97_RS14390	376	AYI82_RS05130	376	AYI77_RS18005	376
	BN1227_RS07070	378	AYI97_RS06410	378	AYI82_RS05655	378	AYI77_RS20425	378
flhF	BN1227_RS07080	458	AYI97_RS06400	458	AYI82_RS05645	458	AYI77_RS20435	458