838259.fig.003a
(a)
838259.fig.003b
(b)
838259.fig.003c
(c)
838259.fig.003d
(d)
Figure 3: (a) Helical protein (PDB ID: 1GZM), (b) a beta barrel protein (PDB ID: 2JMM) oriented within a  Å membrane. The geometric features of each scenario are highlighted in green. (c) shows the hole where atomic/lipid deletion occurred, and (d) shows the protein placed within the membrane.