Survey of Natural Language Processing Techniques in Bioinformatics

Table 1

Web server for protein disorder prediction.

Problem	Name	Websites	Input format
Protein disorder prediction	DisProt	http://www.disprot.org/pondr-fit.php	Fasta or EMBL sequence format
		http://www.disprot.org/metapredictor.php
		http://www.dabi.temple.edu/disprot/predictor.php
	DisEMBL	http://dis.embl.de/	SwissProt ID
	DRIPPRED	http://www.sbc.su.se/~maccallr/disorder/cgi-bin/submit.cgi	Only plain sequence; one sequence once; slow
	FoldIndex	http://bip.weizmann.ac.il/fldbin/findex	Only plain sequence; one sequence once
	IUPred	http://iupred.enzim.hu/	SwissProt ID or plain sequence
	PONDR	http://www.pondr.com/cgi-bin/PONDR/pondr.cgi	Fasta
	PSIPRED	http://bioinf.cs.ucl.ac.uk/psipred/?disopred=1	Raw sequence or fasta format
	SCRATCH	http://scratch.proteomics.ics.uci.edu/	Only plain sequence; one sequence once; slow
	Spritz	http://distill.ucd.ie/spritz/	Raw sequence or fasta format
	RONN	http://www.strubi.ox.ac.uk/RONN/	Fasta, but only one sequence once