Inference of Gene Regulatory Networks Using Bayesian Nonparametric Regression and Topology Information

Table 2

The prediction performances on the DREAM4 100-gene networks.

	Method	Net 1	Net 2	Net 3	Net 4	Net 5	Average
AUROC	BL	0.7180	0.6040	0.6748	0.6551	0.7269	0.6758
	BGL	0.5768	0.5915	0.6148	0.5692	0.5829	0.5878
	BGL_prior	0.7117	0.6745	0.7062	0.6859	0.7327	0.7029
	G1DBN	0.68	0.64	0.68	0.66	0.72	0.6760
	VBSSM	0.59	0.56	0.59	0.67	0.71	0.6240
AUPR	BL	0.1177	0.0830	0.1154	0.1103	0.0776	0.1008
	BGL	0.0318	0.0984	0.0440	0.0685	0.0409	0.0567
	BGL_prior	0.508	0.0656	0.0967	0.1021	0.0730	0.0776
	G1DBN	0.11	0.10	0.13	0.10	0.11	0.1100
	VBSSM	0.08	0.05	0.11	0.10	0.09	0.0860