Research Article

Insights into the Molecular Mechanisms of Protein-Ligand Interactions by Molecular Docking and Molecular Dynamics Simulation: A Case of Oligopeptide Binding Protein

Figure 8

Snapshots from the thermal unfolding simulations for both complexes: (a) LRDPSO-docked complex; (b) LGA-docked complex. The receptor protein structure is represented in a new cartoon secondary structure style, and the ligand is represented in a Vdw style.
(a)
(b)