Structure Optimization for Large Gene Networks Based on Greedy Strategy

Table 3

Yeast’s network results against GeneMANIA.

	Kendall			Spearman			SU
	Input	Pruned	GeSOp	Input	Pruned	GeSOp	Input	Pruned	GeSOp
TP	194918	1942	7863	692753	1909	147360	43991	1722	10281
FP	400383	3273	8423	1770378	3326	293279	95244	2824	18206
Precision	0.32	0.37	0.48	0.28	0.36	0.33	0.31	0.37	0.36
Recall	0.04		0.016	0.08		0.003	0.009		0.002