HMMPred: Accurate Prediction of DNA-Binding Proteins Based on HMM Profiles and XGBoost Feature Selection

Table 2

Prediction results of SVM and RF classifiers based on the jackknife CV.

Classifier	Feature extraction method	ACC	SN	SP	MCC	AUC
SVM	AAC	0.7912	0.8185	0.7655	0.5841	0.8663
	ACT	0.7004	0.6795	0.7200	0.3999	0.7641
	CCT	0.7650	0.7297	0.7982	0.5296	0.8373
	AAC+ACT+CCT	0.8015	0.8127	0.7909	0.6034	0.8806
RF	AAC	0.7930	0.8161	0.7618	0.5885	0.8705
	ACT	0.7369	0.7413	0.7327	0.4738	0.8125
	CCT	0.7547	0.7761	0.7345	0.5106	0.8299
	AAC+ACT+CCT	0.7706	0.8050	0.7382	0.5437	0.8539