Research Article
Potential Genes Associated with the Survival of Lung Adenocarcinoma Were Identified by Methylation
Table 4
The most significantly enriched signaling pathways.
| Gene | MSigDB collection | Gene set name | NES | val | FDR |
| NEDD4 | c2.cp.kegg.v7.1.symbols.gmt | KEGG_FOCAL_ADHESION | 2.666 | 0.002 | 0.008 | KEGG_REGULATION_OF_ACTIN_CYTOSKELETON | 2.523 | 0.002 | 0.008 | KEGG_ECM_RECEPTOR_INTERACTION | 2.511 | 0.002 | 0.008 | c5.bp.v7.1.symbols.gmt | GO_GRANULOCYTE_MIGRATION | 2.562 | 0.002 | 0.011 | GO_DEFENSE_RESPONSE_TO_VIRUS | 2.511 | 0.002 | 0.011 | GO_SUBSTRATE_ADHESION_DEPENDENT_CELL_SPREADING | 2.462 | 0.002 | 0.011 |
| ASB16 | c2.cp.kegg.v7.1.symbols.gmt | KEGG_TASTE_TRANSDUCTION | 1.701 | 0.002 | 0.088 | KEGG_ABC_TRANSPORTERS | 1.605 | 0.006 | 0.088 | KEGG_LINOLEIC_ACID_METABOLISM | 1.518 | 0.031 | 0.139 | c5.bp.v7.1.symbols.gmt | GO_MRNA_SPLICE_SITE_SELECTION | 1.935 | 0.001 | 0.133 | GO_HISTONE_H3_K27_METHYLATION | 1.893 | 0.001 | 0.133 | GO_EXTRACELLULAR_TRANSPORT | 1.871 | 0.001 | 0.133 |
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NES: normalized enrichment score; FDR: false discovery rate.
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