Simulations of Higher-Order Protein Organizations Using a Fuzzy Framework

Figure 2

Probability of large polymers as a function of valency and length of the simulation box (in residue units) in one-to-one (a) and fuzzy (b) binding models. Valency is defined as the number of binding elements. Concentration is the number of molecules/volume (L³). Binding element affinity = 1.0; linker dynamics = 1.0.

(a)

(b)