Hypergraph Regularized Discriminative Nonnegative Matrix Factorization on Sample Classification and Co-Differentially Expressed Gene Selection

Table 12

The FDR of different methods (INTA 2).

Pathway	HDNMF	NMF	DNMF	LNMF	GNMF	GDNMF	HNMF
Ribosome	3.15E-100	1.74E-95	5.55E-84	1.98E-95	3.16E-86	4.28E-93	8.69E-98
Focal adhesion	4.1E-35	2.26E-32	2.43E-32	2.43E-32	2.43E-32	5.4E-31	2.43E-32
ECM-receptor interaction	1.8E-32	8.64E-31	9.13E-31	4.13E-29	9.13E-31	4.13E-29	4.13E-29
Pathogenic Escherichia coli infection	8.07E-17	2.14E-18	2.21E-18	2.21E-18	8.33E-17	2.21E-18	2.21E-18
Antigen processing and presentation	3.48E-15	2.9E-15	3E-15	1.51E-16	3E-15	1.51E-16	3E-15