Research Article
Graph-Based Analysis of RNA Secondary Structure Similarity Comparison
Table 3
The distance matrix of eleven ncRNA sequences produced by our method.
| | NONHSAT000002.2 | NONHSAT000003.2 | NONHSAT000004.2 | MF489813.1 | MF489812.1 | MF489811.1 | MF489810.1 | MF489809.1 | MF489808.1 | MF489806.1 | NT_033777.3 |
| NONHSAT000002.2 | 0 | 0.3882 | 0.4843 | 0.5123 | 0.5178 | 0.5153 | 0.5216 | 0.5212 | 0.5279 | 0.5394 | 0.5510 | NONHSAT000003.2 | | 0 | 0.4571 | 0.5337 | 0.5505 | 0.5504 | 0.5148 | 0.5173 | 0.5160 | 0.5252 | 0.5636 | NONHSAT000004.2 | | | 0 | 0.5184 | 0.4199 | 0.4214 | 0.4698 | 0.5221 | 0.5199 | 0.4999 | 0.5348 | MF489813.1 | | | | 0 | 0.4989 | 0.4802 | 0.4905 | 0.4806 | 0.4824 | 0.5334 | 0.5929 | MF489812.1 | | | | | 0 | 0.0204 | 0.3603 | 0.3634 | 0.4206 | 0.4557 | 0.4776 | MF489811.1 | | | | | | 0 | 0.3597 | 0.3519 | 0.4133 | 0.4616 | 0.4736 | MF489810.1 | | | | | | | 0 | 0.3049 | 0.4157 | 0.4632 | 0.5165 | MF489809.1 | | | | | | | | 0 | 0.3731 | 0.4445 | 0.4902 | MF489808.1 | | | | | | | | | 0 | 0.4139 | 0.4933 | MF489806.1 | | | | | | | | | | 0 | 0.4591 | NT_033777.3 | | | | | | | | | | | 0 |
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