In Search of TGCT Biomarkers: A Comprehensive <i>In Silico</i> and Histopathological Analysis

<div>DNA methylation of genes of interest between seminoma (SE) and nonseminoma (NS), by UALCAN. Bioinformatic analysis of DNA methylation of genes of interest in SE and NS TCGA samples using UALCAN. DNA methylation is shown as <svg height="12.7178pt" id="M28" style="vertical-align:-3.42947pt" version="1.1" viewbox="-0.0498162 -9.28833 7.68094 12.7178" width="7.68094pt" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"><g transform="matrix(.013,0,0,-0.013,0,0)"><path d="M558 587C558 666 497 712 432 712C379 712 330 691 284 650C212 586 178 508 148 348L71 -65C49 -185 35 -229 23 -235L27 -261C49 -259 101 -251 124 -224C131 -216 138 -178 159 -24C171 66 197 200 227 356C264 550 295 668 393 668C443 668 479 632 479 575C479 516 446 458 383 418C361 404 344 398 318 397L296 350C395 338 460 281 460 192C460 110 411 40 300 40C258 40 215 55 192 69L181 51C191 18 222 -16 266 -16C308 -16 351 1 397 26C471 67 545 142 545 221C545 315 486 365 401 395C469 437 558 498 558 587Z"></path></g></svg> values, represented as a box and whisker plot including interquartile range with the minimum, 25th percentile, median, 75th percentile, and maximum values. For presenting the <svg height="10.2124pt" id="M29" style="vertical-align:-3.42943pt" version="1.1" viewbox="-0.0498162 -6.78297 7.83752 10.2124" width="7.83752pt" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"><g transform="matrix(.013,0,0,-0.013,0,0)"><path d="M570 304C570 398 525 448 414 448C385 448 343 445 312 434L329 511L321 518C297 504 262 482 244 460L233 411C195 397 159 381 128 358L135 332C160 347 189 360 224 373L111 -147C97 -210 84 -218 17 -231L13 -257L254 -247L259 -218L233 -216C183 -212 177 -202 189 -142L218 -1C238 -10 266 -12 283 -12C351 3 429 48 483 105C543 168 570 242 570 304ZM482 289C482 161 380 33 304 33C278 33 248 51 233 69L303 396C326 400 352 403 369 403C428 403 482 380 482 289Z"></path></g></svg> value, the asterisk rating system was used: <span class="nowrap"><svg height="13.532pt" id="M30" style="vertical-align:-3.4295pt" version="1.1" viewbox="-0.0498162 -10.1025 50.6052 13.532" width="50.6052pt" xmlns="http://www.w3.org/2000/svg" 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Differential DNA methylation is shown across multiple genes.</div>

Disease Markers

fig10

Figure 10

Figure 10: In Search of TGCT Biomarkers: A Comprehensive <i>In Silico</i> and Histopathological Analysis 

Disease Markers

In Search of TGCT Biomarkers: A Comprehensive In Silico and Histopathological Analysis

Figure 10