Research Article
Association Study of Coronary Artery Disease-Associated Genome-Wide Significant SNPs with Coronary Stenosis in Pakistani Population
Table 2
Characteristics of SNPs that showed nominally significant association (
) or a trend for association (
) by the additive model.
| Chr # | Gene | SNP ID | RA | RAF | OR (95% CI) | value | FDR ( value) |
| 10 | PLG | rs4252120 | C | 0.168 | 1.714 (1.161-2.53) | 0.00534 | 0.1744 | 6 | KIAA1462 | rs2505083 | C | 0.364 | 1.322 (1.007-1.736) | 0.007267 | 0.1744 | 6 | SLC22A3-LPAL2-LPA | rs2048327 | G | 0.301 | 0.7662 (0.577-1.017) | 0.045751 | 0.532787 | 2 | ABCG5-ABCG8 | rs6544713 | T | 0.335 | 1.176 (0.892-1.55) | 0.064877 | 0.632787 | 10 | CXCL12 | rs2047009 | C | 0.344 | 1.203 (0.915-1.329) | 0.076773 | 0.632787 | 1 | PCSK9 | rs11206510 | C | 0.084 | 1.482 (0.889-2.47) | 0.079098 | 0.632787 | 6 | ANKS1A | rs17609940 | C | 0.132 | 1.389 (0.906-2.128) | 0.099173 | 0.67526 |
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Chr=chromosome; SNP=single-nucleotide polymorphism; RA=risk allele; RAF=risk allele frequency; FDR=false discovery rate ( value). |