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| Author (year) | Population | Mean age (year) | Localization | Neural network | Segmentation algorithm | Segmentation ground truth |
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1 | Ackermans (2021) [19] | Cancer surgery cases, colorectal, ovarian, pancreatic cancers (training); polytrauma patients (testing) | Testing: 74 | L3 muscle (L3M), intramuscular adipose tissue (IMAT), visceral adipose tissue (VAT), and subcutaneous adipose tissue (SAT) | DLNN | 2D U-Net | Manual segmentation using software (TomoVision software “sliceOmatic”) |
2 | Borrelli (2021) [51] | Lymphoma (training) Prostate cancer (testing) | Training: 61 Testing: 67 | L3 | CNN | RECOMIA platform U-Net | Manual segmentation using cloud-based annotation tool (RECOMIA, http://www.recomia.org) |
3 | Castiglione (2021) [52] | Pediatric patients | 0-18 | Skeletal muscle area at the L3 level; 12-section or 18-section MIP images | CNN | U-Net | Manual segmentation |
4 | Amarasinghe (2021) [49] | Non-small-cell lung cancer | 67 | Skeletal muscle at the L3 vertebra | CNN+DL | 2.5D U-Nets | Manual segmentation based on the Alberta protocol |
5 | Kim (2021) [58] | Gastric cancers receiving gastrectomy | 60.4 | L3 | CNN | ResNet-18 | Manual segmentation with software (Aquarius 3D workstation, TeraRecon) |
6 | Magudia (2021) [61] | Pancreatic adenocarcinoma | 52 | L3 | CNN | DenseNet architecture model to predict spatial offset U-Net architecture model for segment | Manual segmentation with software internal data set: sliceOmatic (TomoVision, Magog, Canada); external data set: OsiriX (Pixmeo, Bernex, Switzerland) |
7 | Koitka (2021) [59] | Individuals with abdominal CT scans (unknown patients) | Training: 62.6 Test: 65.6 | Whole abdomen and not just on L3 slices | CNN | Multiresolution U-Net 3D | For annotation, the ITK Snap software (version 3.8.0) was used. Region segmentation was performed manually with a polygon tool |
8 | Hsu (2021) [57] | Pancreatic cancer | 67 | L3 | CNN | ResNet-18 model for slice 2D U-Net to segment | Manual annotated, expert labeled |
9 | Zopfs (2020) [16] | The Cancer Imaging Archive’s collection “CT Lymph Nodes” and the institutional picture archiving and communication system | 62 | Containing the abdomen and images above (cranial) and below (caudal) this region | DCNN | U-Net | Manual segmentation |
10 | Edwards (2020) [54] | Adult patients | 18-75 | L3 | CNN | Supervised U-Net | Manual segmentation |
11 | Hemke (2020) [56] | 200 subjects | 49.9 | Pelvic content | DCNN | U-Net | Manual segmentation using manual and semiautomated thresholding using the Osirix DICOM viewer (version 6.5.2, http://www.osirix-viewer.com/index.html) |
12 | Burns (2020) [47] | 102 sequential patients | 68 | L1-L5 | CNN | U-Net | Annotation utilizing ITK-SNAP software. Region segmentation was performed manually |
13 | Paris (2020) [48] | Critically ill, liver cirrhosis, pancreatic cancer, and clear cell renal cell carcinoma patients, renal and liver donors | Training/validation: 52.6 Test: 53.9 | L3 | DCNN | Adapt U-Net | Manually segmented by using SliceOmatic (TomoVision, Montreal, Canada, version 4.2, 4.3, and 5.0) |
14 | Blanc-Durand (2020) [46] | Unknown subjects | N/A | L3 | DCNN | 2D U-Net | Manually annotated using the public freeware 3DSlicer |
15 | Park (2020) [62] | Gastric cancer, pancreatic cancer, and sepsis and healthy individuals | Training: 56.1 Internal validation: 56.6 External validation: 61.1 | L3 | CNN | FCN-based | Semiautomated segmentation software (AsanJ-Morphometry) followed by manual correction |
16 | Barnard (2019) [50] | Older adults, who were current or former smokers | 71.6 | T12 | CNN | U-Net | Manual segmentation using Mimics software (Materialise, Leuven, Belgium) |
17 | Graffy (2019) [55] | Asymptomatic adults | 57.1 | L3 | CNN | U-Net | Manual segmentation |
18 | Dabiri (2019) [53] | Data from Cross Cancer Institute (CCI), University of Alberta, Canada | N/A | L3 and T4 | CNN | FCN with VGG16 | Manual segmentation using Slice-O-Matic V4.3 software (TomoVision, Montreal, Canada) |
19 | Lee (2017) [60] | Patients with lung cancer | 63 | L3 | CNN | FCN of ImageNet pretrained model | Semiautomated threshold-based segmentation, followed by manual correction |
20 | Shephard (2015) [63] | N/A | N/A | N/A | N/A | N/A | |
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