| Diseases | CHF, CHM, CHM compound, and acupuncture | Targets or signaling pathways | Proteomics methods | References |
| Cardiocerebrovascular diseases | | | | | Arrhythmias | Dingxin recipe | Prohibitin | 2DE, MALDI-TOF MS | [50] | Ischemic myocardial injury | Buyang Huanwu decoction | Atrial natriuretic factor | 2DE, MALDI-TOF MS | [51] | Cardiovascular disorders | Salvianolic acid B | Integrin α2β | 2DE, MALDI-TOF MS/MS | [52] | Cardiovascular disorders | Salvianolic acids | Energy metabolism, lipid metabolism | 2DE, MALDI-TOF MS/MS | [53] | Epileptic seizures | Uncaria rhynchophylla | MIF and cyclophilin A | 2DE | [54] | Alzheimer’s disease | Yizhijiannao granule | NADH dehydrogenase iron-sulfur protein 6 | 2DE, peptide mass fingerprint | [55] | Neurodegenerative diseases | Ginkgo biloba L. extracts | PPAP subunit Band CRMP2 | 2DE, MALDI-TOF MS | [56] | Cerebrovascular diseases | Tianma | Gnao1, Dctn2, Anxa5, Pacsin1, and Arf3 | iTRAQ | [43] | Hepatorenal diseases | | | | | Liver cirrhosis | Yiguanjian decoction | Cu/Zn SOD, DJ-1 | 2DE, MALDI-TOF-TOF MS | [57] | Liver fibrosis | Fuzheng Huayu | Vimentin | 2DE/MS | [58] | Liver injury | Yin-Chen-Hao-Tang | Zinc finger protein 407, haptoglobin | RP-HPLC | [59] | Immunological liver injury | Salvia miltiorrhiza | PRDX6 | 2D-DIGE, MALDI-TOF MS | [60] | Nephropathy | Tanshinone IIA | Oxidative stress | 2DE | [61] | Diabetes | | | | | Diabetes | Granules | Apolipoprotein E (apoE) and C3 | 2DE, MALDI-TOF MS/MS | [62] | Type 2 diabetes mellitus | ZiBuPiYin recipe | DRP-2 and PDHE1α | Fluorescence-based DIGE, MS | [63] | Type 2 diabetes mellitus | Tianqijiangtang capsule | Haptoglobin, transthyretin, and prothrombin | 2DE, MALDI-TOF-TOF/MS | [64] | Other diseases | | | | | Gan stagnancy syndrome |
— | TTR, aryl sulfotransferase | 2DE, MALDI-TOF MS | [65] | Functional dyspepsia | Wei Kangning | Glutathione S-transferase, pi2 | 2DE, MALDI-TOF MS | [66] | Spontaneously hypertensive | Formula | HSP-27, annexin-A1, MFN-2, and Rho | 2DE, MALDI-TOF MS | [67] | Allergic airway | Xiao-Qing-Long-Tang | Spectrin α2 | 2DE, MS, MS/MS | [68] | Silicosis | Gymnadenia conopsea | Cathepsin D precursor, peroxiredoxin-1 | 2DE, MALDI-TOF MS | [69] | Anxiety disorders | Polysaccharides | Beta-synuclein, DJ-1, and peroxiredoxin-2 | 2DE/MS | [70] | Normal | Acupuncture | NAD-isocitrate dehydrogenase | 2DE, MALDI-TOF MS | [71] | Normal | Acupuncture | Local stimulus response, energy metabolism | 2DE/MS | [72] | Asthma | Acupuncture | S100A8, RAGE, S100A11, and CC10 | 2DE, LC-MS/MS | [73] |
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