The Classification of Sini Decoction Pattern in Traditional Chinese Medicine by Gene Expression Profiling

Table 3

The correlation plots between microarray data and qPCR data.

Genes	Samples	Microarray data		qPCR data
		log2 of microarray relative gene expression data:	log2 ratio of two samples’ microarray relative gene expression data: , that is,	log2 of qPCR relative gene expression data: Ct	log2 ratio of two samples’ qPCR relative gene expression data: Ct, that is,
GNG2	(a) L2A1; (b) L2B2	0.572; 0.097	0.476	−0.35; 0.14	0.49
	(a) L2B2; (b) L2A2	0.097; 0.235	−0.139	0.14; 0.80	0.66
	(a) L2A2; (b) L2D1	0.235; −0.389	0.625	0.80; 1.75	0.95
	(a) L2D1; (b) L2C2	−0.389; −0.222	−0.167	1.75; 0.50	−1.25
	(a) L2C2; (b) L2D2	−0.222; −0.258	0.035	0.50; 1.21	0.71
	(a) L2D2; (b) L2D3	−0.258; 0.131	−0.388	1.21; 0.67	−0.54
	(a) L2D3; (b) L2A1	0.131; 0.572	−0.442	0.67; −0.35	−1.02
RUNX3	(a) L2A1; (b) L2B2	0.835; −0.022	0.858	1.39; 2.49	1.10
	(a) L2B2; (b) L2A2	−0.022; −0.042	0.020	2.49; 2.81	0.32
	(a) L2A2; (b) L2D1	−0.042; −0.099	0.057	2.81; 2.85	0.04
	(a) L2D1; (b) L2C2	−0.099; −0.258	0.159	2.85; 2.37	−0.48
	(a) L2C2; (b) L2D2	−0.258; −0.190	−0.068	2.37; 2.86	0.49
	(a) L2D2; (b) L2D3	−0.190; 0.196	−0.385	2.86; 2.37	−0.49
	(a) L2D3; (b) L2A1	0.196; 0.835	−0.640	2.37; 1.39	−0.98
CST7	(a) L2A1; (b) L2B2	1.301; 0.224	1.076	−1.65; −0.90	0.75
	(a) L2B2; (b) L2A2	0.224; 0.493	−0.268	−0.90; −0.72	0.18
	(a) L2A2; (b) L2D1	0.493; −0.454	0.946	−0.72; 0.04	0.76
	(a) L2D1; (b) L2C2	−0.454; −0.414	−0.039	0.04; −0.01	−0.05
	(a) L2C2; (b) L2D2	−0.414; −0.325	−0.089	−0.01; 0.23	0.24
	(a) L2D2; (b) L2D3	−0.325; 0.300	−0.626	0.23; −0.62	−0.85
	(a) L2D3; (b) L2A1	0.300; 1.301	−1.000	−0.62; −1.65	−1.03
MNDA	(a) L2A1; (b) L2B2	−1.136; 0.313	−1.449	2.29; 0.76	−1.53
	(a) L2B2; (b) L2A2	0.313; −0.229	0.542	0.76; 1.88	1.12
	(a) L2A2; (b) L2D1	−0.229; −0.185	−0.044	1.88; 1.31	−0.57
	(a) L2D1; (b) L2C2	−0.185; −0.015	−0.170	1.31; −0.08	−1.39
	(a) L2C2; (b) L2D2	−0.015; 0.349	−0.365	−0.08; 0.17	0.25
	(a) L2D2; (b) L2D3	0.349; 0.357	−0.008	0.17; 1.10	0.93
	(a) L2D3; (b) L2A1	0.357; −1.136	1.493	1.10; 2.29	1.19