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International Journal of Biomedical Imaging
Volume 2011, Article ID 918978, 15 pages
http://dx.doi.org/10.1155/2011/918978
Research Article

Protein Surface Characterization Using an Invariant Descriptor

1Lane Department of Computer Science and Electrical Engineering, West Virginia University, Morgantown, WV 26506, USA
2Department of Pathology, Anatomy and Cell Biology Jefferson Medical College, Thomas Jefferson University, Philadelphia, PA 19107, USA

Received 6 July 2011; Accepted 14 August 2011

Academic Editor: Guowei Wei

Copyright © 2011 Zainab Abu Deeb et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Citations to this Article [6 citations]

The following is the list of published articles that have cited the current article.

  • Sebastian Daberdaku, “Parallel Computation of Voxelised Protein Surfaces with OpenMP,” Proceedings of the 6th International Workshop on Parallelism in Bioinformatics - PBio 2018, pp. 19–29, . View at Publisher · View at Google Scholar
  • Hsin-Wei Wang, Chia-Han Chu, Wen-Ching Wang, and Tun-Wen Pai, “A local average distance descriptor for flexible protein structure comparison,” Bmc Bioinformatics, vol. 15, 2014. View at Publisher · View at Google Scholar
  • Carlo Ferrari, and Sebastian Daberdaku, “Parallel Computation of Voxelized Macromolecular Surfaces by Spatial Slicing,” Proceedings - 14th IEEE International Conference on Trust, Security and Privacy in Computing and Communications, TrustCom 2015, vol. 3, pp. 184–189, 2015. View at Publisher · View at Google Scholar
  • Sumi Singh, Wu Xu, and Vijay V. Raghavan, “Descriptor based protein structure representation using triangular spatial relationships in 3-D,” Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017, vol. 2017-, pp. 1114–1118, 2017. View at Publisher · View at Google Scholar
  • Sebastian Daberdaku, and Carlo Ferrari, “Computing voxelised representations of macromolecular surfaces: A parallel approach,” International Journal of High Performance Computing Applications, vol. 32, no. 3, pp. 407–432, 2018. View at Publisher · View at Google Scholar
  • Sebastian Daberdaku, and Carlo Ferrari, “Fast Computation of High-resolution Solvent Excluded Protein Surface with OpenMP,” Proceedings - 2018 International Conference on High Performance Computing and Simulation, HPCS 2018, pp. 789–796, 2018. View at Publisher · View at Google Scholar