Table 1: Ranking the screened proteins according to their similarity to the query protein. Results are shown for the Top 30 hits for one query protein from each of the three groups, using DATASET-A (416 protein chains).
(a) DRC on query protein 1UDI chain I (Group 1)

Protein PDB IDChainRankDistance

1UDII10
2ZHXB22.1306
1LQMB32.3509
1LQGC42.4589
2UUGC52.5353
1EUIC72.5920
2ZHXL82.6104
1UGHI102.6349
2UGIA152.6809
1UGIE162.6872
2ZHXH192.6969
2ZHXD212.7006
2ZHXN222.7017
2ZHXJ232.7141
1UGIG252.7261
1EMJA422.7758
2BOOA452.7808
1UGID472.7868
2OWRB502.7952
2J8XD612.8129
1LQGD702.8263
1Q3FA902.8533
2UUGD992.8675
1UGIA1012.8689
2OWRC1102.8749
2ZHXF1162.885
2OWQB1292.8977
1SSPE1412.9115
1UGIC1422.9117
2ZHXA1472.915

(b) DRC on query protein 1QKN chain A (Group 2)

Protein PDB IDChainRankDistance

1QKNA10
2J7XA21.3769
2J7YA31.5753
1QKMA41.6793
1NDEA51.7368
2GIUA61.7371
1L2IA71.7460
1U3RB81.7670
3ERDA91.7683
3OS9A101.7715
2IOGA111.7738
3LTXC121.7742
1YIMA131.7854
3ERTA141.7966
1U3QD151.8009
1YY4A161.8090
2OUZA171.8126
1YINA181.8152
1XP6A191.8260
2AYRA201.8269
3OS8D211.8311
2QH6A221.8312
3OSAA231.8367
1L2JA241.8385
2JJ3A251.8438
1G50A261.8490
3OS8A271.8509
2FSZA281.8518
2QGWA291.8604
1UOMA301.8683

(c) DRC on query protein 1YKR chain A (Group 3)

Protein PDB IDChainRankDistance

1YKRA10
2UZOA21.0396
2R3OA31.0810
3PXYA41.0846
3PY1A51.0940
2WMAA61.1389
2IW6A71.1609
3NS9A81.2043
3IGGA91.2141
2WFYA101.2179
2C5YA111.2270
3DDPA121.2280
2J9MA131.2284
2R3JA141.2374
2R3LA151.2402
3PXRA161.2422
2DUVA171.2534
1W8CA181.2586
3DOGA191.2793
2V22A201.2822
2R3PA211.2883
2V22C221.2963
3IG7A231.3207
2JGZA241.3275
2R64A251.3303
2WHBA261.3381
2VTNA271.3458
3LFNA281.3476
2WIPA291.3514
2BKZA301.3580