Identification of Crucial lncRNAs for Luminal A Breast Cancer through RNA Sequencing

Table 4

DElncRNAs-nearby DEmRNA pairs.

Chr	lncRNA			mRNA
	Symbol	Start	End	Symbol	Start	End
2	C2orf48	10141382	10211725	AC007240.1	10122739	10199288
11	WT1-AS	32435518	32458769	WT1	32387775	32435630
19	LIPE-AS1	42397128	42652355	LIPE	42401507	42427426
13	LINC00598	40079106	40535807	FOXO1	40469953	40666597
19	AC020907.2	35138824	35151336	FXYD1	35138808	35143109
19	AC020907.2	35138824	35151336	LGI4	35124513	35142451
5	C5orf66	135033280	135358219	PITX1	135027735	135034813
9	PGM5-AS1	68355189	68357852	PGM5	68328308	68531061
1	AL031316.1	209661364	209724125	G0S2	209675420	209676388
1	HSD11B1-AS1	209661364	209724125	HSD11B1	209686178	209734950
1	AL139220.2	44030443	44115913	SLC6A9	43991500	44031467
17	HOXB-AS3	48549630	48606414	HOXB3	48548870	48604912
2	AC104809.2	240954617	240967451	CROCC2	240906330	240993311
12	TRHDE-AS1	72253508	72274907	TRHDE	72087266	72670757
9	VLDLR-AS1	2421597	2643359	VLDLR	2621834	2660053
3	PDZRN3-AS1	73621713	73626796	PDZRN3	73382433	73624940
11	AC132217.1	2129121	2129964	IGF2	2129112	2149603
2	AC108025.2	5696220	5708095	SOX11	5692667	5701385
3	ALDH1L1-AS2	126180065	126210169	ALDH1L1	126103562	126197994
17	AC091180.2	49361165	49369998	ZNF652	49289206	49362473
4	AC097534.1	173322206	173329694	GALNT7	173168753	173323967
12	HOXC-AS3	53981509	53985519	HOXC10	53985065	53990279
7	AC007036.3	30157531	30159534	MTURN	30134810	30162762
12	AC025423.4	68841288	68843237	CPM	68842197	68971570
12	AC079174.1	106245613	106246956	CKAP4	106237877	106304279
X	RHOXF1-AS1	120036236	120146854	RHOXF1	120109053	120115937
15	AC106028.2	92805770	92808567	FAM174B	92617443	92809884
16	AC026461.1	56682470	56687807	MT1X	56682424	56684196
17	AC124319.1	80315651	80316633	RNF213	80260866	80398786
19	AC005546.1	13131571	13132410	NACC1	13118103	13141141
17	RNF157-AS1	76140556	76154650	FOXJ1	76136333	76141299
17	RNF157-AS1	76140556	76154650	RNF157	76142453	76240373
1	LINC01140	87129765	87169198	AC093155.3	86993009	87169204
17	AC002546.1	69477139	69501755	MAP2K6	69414698	69553861
19	AC074135.1	23075201	23100361	ZNF730	23075210	23147219
19	AC011503.1	23919081	23957930	ZNF726	23914876	23945159
15	AC118658.2	98660210	98660668	IGF1R	98648539	98964530