Research Article
Identification of Crucial lncRNAs for Luminal A Breast Cancer through RNA Sequencing
Table 4
DElncRNAs-nearby DEmRNA pairs.
| Chr | lncRNA | mRNA | Symbol | Start | End | Symbol | Start | End |
| 2 | C2orf48 | 10141382 | 10211725 | AC007240.1 | 10122739 | 10199288 | 11 | WT1-AS | 32435518 | 32458769 | WT1 | 32387775 | 32435630 | 19 | LIPE-AS1 | 42397128 | 42652355 | LIPE | 42401507 | 42427426 | 13 | LINC00598 | 40079106 | 40535807 | FOXO1 | 40469953 | 40666597 | 19 | AC020907.2 | 35138824 | 35151336 | FXYD1 | 35138808 | 35143109 | 19 | AC020907.2 | 35138824 | 35151336 | LGI4 | 35124513 | 35142451 | 5 | C5orf66 | 135033280 | 135358219 | PITX1 | 135027735 | 135034813 | 9 | PGM5-AS1 | 68355189 | 68357852 | PGM5 | 68328308 | 68531061 | 1 | AL031316.1 | 209661364 | 209724125 | G0S2 | 209675420 | 209676388 | 1 | HSD11B1-AS1 | 209661364 | 209724125 | HSD11B1 | 209686178 | 209734950 | 1 | AL139220.2 | 44030443 | 44115913 | SLC6A9 | 43991500 | 44031467 | 17 | HOXB-AS3 | 48549630 | 48606414 | HOXB3 | 48548870 | 48604912 | 2 | AC104809.2 | 240954617 | 240967451 | CROCC2 | 240906330 | 240993311 | 12 | TRHDE-AS1 | 72253508 | 72274907 | TRHDE | 72087266 | 72670757 | 9 | VLDLR-AS1 | 2421597 | 2643359 | VLDLR | 2621834 | 2660053 | 3 | PDZRN3-AS1 | 73621713 | 73626796 | PDZRN3 | 73382433 | 73624940 | 11 | AC132217.1 | 2129121 | 2129964 | IGF2 | 2129112 | 2149603 | 2 | AC108025.2 | 5696220 | 5708095 | SOX11 | 5692667 | 5701385 | 3 | ALDH1L1-AS2 | 126180065 | 126210169 | ALDH1L1 | 126103562 | 126197994 | 17 | AC091180.2 | 49361165 | 49369998 | ZNF652 | 49289206 | 49362473 | 4 | AC097534.1 | 173322206 | 173329694 | GALNT7 | 173168753 | 173323967 | 12 | HOXC-AS3 | 53981509 | 53985519 | HOXC10 | 53985065 | 53990279 | 7 | AC007036.3 | 30157531 | 30159534 | MTURN | 30134810 | 30162762 | 12 | AC025423.4 | 68841288 | 68843237 | CPM | 68842197 | 68971570 | 12 | AC079174.1 | 106245613 | 106246956 | CKAP4 | 106237877 | 106304279 | X | RHOXF1-AS1 | 120036236 | 120146854 | RHOXF1 | 120109053 | 120115937 | 15 | AC106028.2 | 92805770 | 92808567 | FAM174B | 92617443 | 92809884 | 16 | AC026461.1 | 56682470 | 56687807 | MT1X | 56682424 | 56684196 | 17 | AC124319.1 | 80315651 | 80316633 | RNF213 | 80260866 | 80398786 | 19 | AC005546.1 | 13131571 | 13132410 | NACC1 | 13118103 | 13141141 | 17 | RNF157-AS1 | 76140556 | 76154650 | FOXJ1 | 76136333 | 76141299 | 17 | RNF157-AS1 | 76140556 | 76154650 | RNF157 | 76142453 | 76240373 | 1 | LINC01140 | 87129765 | 87169198 | AC093155.3 | 86993009 | 87169204 | 17 | AC002546.1 | 69477139 | 69501755 | MAP2K6 | 69414698 | 69553861 | 19 | AC074135.1 | 23075201 | 23100361 | ZNF730 | 23075210 | 23147219 | 19 | AC011503.1 | 23919081 | 23957930 | ZNF726 | 23914876 | 23945159 | 15 | AC118658.2 | 98660210 | 98660668 | IGF1R | 98648539 | 98964530 |
|
|