International Journal of Genomics / 2009 / Article / Fig 1

Research Article

Evolutionary Conservation Levels of Subunits of Histone-Modifying Protein Complexes in Fungi

Figure 1

Phylogenetic relationships among the histone acetyltransferase catalytic subunit ELP3 and its homologues. A total of 496 amino acid sites were considered from multiple alignments with all the gap sites deleted. (a) Neighbor-joining tree was generated with 1000 bootstrap replicates using the MEGA software [8]. The number at each node represents the percentage obtained in the bootstrap analysis. The bar indicates a 5% difference in the evolutionary distance. (b) Maximum likelihood tree was generated with 100 bootstrap replicates using the PHYLIP software [9]. The number at each node represents the percentage obtained in the bootstrap analysis. The JTT model was used as the model of amino acid substitution. Number of times to jumble in the PROML program was 2.
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